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bjp_ig3402_scaffold_1044

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_1044_1
R_WWE3_53_10, WWE3, Bacteria

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1..4845
DNA (4845bp) protein (1615aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WWE3_53_10_curated
outer membrane protein id=5100250 bin=WS6_GWC1_33_20 species=WS6_GWF1_33_233 genus=WS6_GWF1_33_233 taxon_order=WS6_GWF1_33_233 taxon_class=WS6_GWF1_33_233 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria)
hypothetical protein
bjp_ig3402_scaffold_1044_2
R_RIF_OD1_13_47_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

4966..5571
DNA (606bp) protein (202aa)
id=2648850 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_47_11_curated
bjp_ig3402_scaffold_1044_3
R_OD1_Azambacteria_40_24, Azambacteria, Parcubacteria, Bacteria

Not on your lists

5580..8258
DNA (2679bp) protein (893aa)
parallel beta-helix repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Azambacteria_40_24_curated
S-layer-like array protein id=4901179 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
parallel beta-helix repeat-containing protein
bjp_ig3402_scaffold_1044_4
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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8282..9607
DNA (1326bp) protein (442aa)
O-antigen ligase-related protein Tax=RBG_13_RIF_OD1_08_37_53_curated
O-antigen ligase-related protein id=1947703 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
bjp_ig3402_scaffold_1044_5
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

9707..11077
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000368B626
hypothetical protein Tax=RBG_13_RIF_OD1_08_37_53_curated
hypothetical protein
bjp_ig3402_scaffold_1044_6
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

11086..11772
DNA (687bp) protein (229aa)
hypothetical protein Tax=RBG_13_RIF_OD1_08_37_53_curated
SNARE associated protein id=1947701 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
bjp_ig3402_scaffold_1044_7
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

11777..11938
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003738F41
membrane protein Tax=RBG_13_RIF_OD1_08_37_53_curated
bjp_ig3402_scaffold_1044_8
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

12140..12340
DNA (201bp) protein (67aa)
Hybrid cluster protein-associated redox disulfide domain n=2 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VPA1_9EURY
hydrid cluster protein-associated redox disulfide domain protein Tax=RBG_13_RIF_OD1_08_37_53_curated
hydrid cluster protein-associated redox disulfide domain protein
bjp_ig3402_scaffold_1044_9
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

12337..14109
DNA (1773bp) protein (591aa)
PHP domain-containing protein; K02347 DNA polymerase (family X) Tax=RBG_13_RIF_OD1_08_37_53_curated
nis:NIS_1287 family X DNA polymerase IV; K02347 DNA polymerase (family X) id=133327 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
PHP domain-containing protein
bjp_ig3402_scaffold_1044_10

Not on your lists

14264..15019
DNA (756bp) protein (252aa)
coiled-coil 185..206 id=2545 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE16211.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_1044_11
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(15443..15763)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EPM2_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
bjp_ig3402_scaffold_1044_12

Not on your lists

15967..16824
DNA (858bp) protein (286aa)
Retron-type reverse transcriptase {ECO:0000313|EMBL:KKS34678.1}; TaxID=1618927 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_13.;"
RNA-directed DNA polymerase (reverse transcriptase) id=41398 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
RNA-directed DNA polymerase Reverse transcriptase
bjp_ig3402_scaffold_1044_13
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

16821..17201
DNA (381bp) protein (127aa)
Phosphotransbutyrylase n=1 Tax=uncultured bacterium RepID=K2EGJ5_9BACT
hypothetical protein Tax=RBG_13_RIF_OD1_08_37_53_curated
VanZ family protein
bjp_ig3402_scaffold_1044_14
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

17224..17574
DNA (351bp) protein (117aa)
Tax=RBG_13_RIF_OD1_08_37_53_curated
bjp_ig3402_scaffold_1044_15
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

17537..17995
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003733891
ssra-binding protein; K03664 SsrA-binding protein Tax=RBG_13_RIF_OD1_08_37_53_curated
smpB; ssrA RNA (tmRNA)-binding protein
bjp_ig3402_scaffold_1044_16
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18479..18799
DNA (321bp) protein (107aa)
Endo/excinuclease amino domain protein {ECO:0000313|EMBL:KKR38742.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
GIY-YIG catalytic domain protein id=2824635 bin=GWC1_OD1_38_17 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
bjp_ig3402_scaffold_1044_17
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

18838..19407
DNA (570bp) protein (190aa)
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RBG_13_RIF_OD1_08_37_53_curated
translation initiation factor IF-3; K02520 translation initiation factor IF-3 id=2952 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
translation initiation factor 3 (bIF-3)
bjp_ig3402_scaffold_1044_18
unknown

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19443..19568
DNA (126bp) protein (42aa)

This feature has no annotations

bjp_ig3402_scaffold_1044_19
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


19571..19921
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003703DCA
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=RBG_13_RIF_OD1_08_37_53_curated
50S ribosomal protein L20
bjp_ig3402_scaffold_1044_20
CG_CPR03_03, CG_CPR03, Bacteria

Not on your lists


20000..21577
DNA (1578bp) protein (526aa)
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=CG_CPR03_03
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase id=2494908 bin=GWB1_Berkelbacteria_38_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
Displaying 20 items

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