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bjp_ig3402_scaffold_2641

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_2641_1
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(3..569)
DNA (567bp) protein (189aa)
D-isomer specific 2-hydroxyacid dehydrogenase Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein id=3506657 bin=GWC1_OD1_38_17 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
D-isomer specific 2-hydroxyacid dehydrogenase
bjp_ig3402_scaffold_2641_2

Not on your lists

651..1229
DNA (579bp) protein (193aa)
Transposase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY57_9BACT
Transposase {ECO:0000313|EMBL:KKR58645.1}; TaxID=1618924 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_40_31.;"
hypothetical protein
bjp_ig3402_scaffold_2641_3
unknown

Not on your lists

comp(1355..1603)
DNA (249bp) protein (83aa)

This feature has no annotations

bjp_ig3402_scaffold_2641_4
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(1676..2539)
DNA (864bp) protein (288aa)
Tagatose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Tagatose-bisphosphate aldolase id=4790072 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) rbh
Tagatose-bisphosphate aldolase
bjp_ig3402_scaffold_2641_5
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(2552..3322)
DNA (771bp) protein (257aa)
putative Ribokinase (EC:2.7.1.15) Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
carbohydrate kinase PfkB; K00852 ribokinase [EC:2.7.1.15] id=5803344 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Sugar kinase, ribokinase family
bjp_ig3402_scaffold_2641_6
unknown

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comp(3503..3721)
DNA (219bp) protein (73aa)

This feature has no annotations

bjp_ig3402_scaffold_2641_7
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(3749..4756)
DNA (1008bp) protein (336aa)
putative Ribokinase (EC:2.7.1.15) Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
PfkB family kinase, partial id=2130223 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
bjp_ig3402_scaffold_2641_8
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists

comp(4768..5763)
DNA (996bp) protein (332aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR54172.1}; TaxID=1618784 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;"
Transketolase central region id=3506674 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation rbh
transketolase
bjp_ig3402_scaffold_2641_9
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(5765..6643)
DNA (879bp) protein (293aa)
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003606196
Transketolase protein
bjp_ig3402_scaffold_2641_10
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(6630..7259)
DNA (630bp) protein (210aa)
hypothetical protein; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036FE8E4
ribulose-phosphate 3-epimerase
bjp_ig3402_scaffold_2641_11
GWC1_OD1_38_17, Parcubacteria, Bacteria

Not on your lists

comp(7331..7774)
DNA (444bp) protein (148aa)
Ribose-5-phosphate isomerase B id=3506680 bin=GWC1_OD1_38_17 species=Robiginitalea biformata genus=Robiginitalea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:KKQ58608.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
ribose-5-phosphate isomerase B
bjp_ig3402_scaffold_2641_12
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(7771..8187)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YC15_DICT6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI18491.1}; TaxID=309799 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus thermophilum (strain ATCC 3594
bjp_ig3402_scaffold_2641_13
RBG_13_RIF_OD1_08_40_8_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(8189..8623)
DNA (435bp) protein (145aa)
Nucleotidyltransferase, putative n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YBA4_DICT6
nucleotidyltransferase Tax=RBG_13_RIF_OD1_08_40_8_curated
nucleotidyltransferase
bjp_ig3402_scaffold_2641_14
unknown

Not on your lists

comp(8733..8912)
DNA (180bp) protein (60aa)

This feature has no annotations

bjp_ig3402_scaffold_2641_15
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(8851..9483)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA255-J07 RepID=UPI000374D2D2
Uncharacterized protein {ECO:0000313|EMBL:KKS71726.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein
bjp_ig3402_scaffold_2641_16
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(9494..10477)
DNA (984bp) protein (328aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12 1.2.1.13); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000378059E
glyceraldehyde 3-phosphate dehydrogenase
bjp_ig3402_scaffold_2641_17
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

10571..11236
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D0U4B2_9GAMM id=130478 bin=ACD7 species=uncultured SUP05 cluster bacterium genus=unknown taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:KKS72637.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein
bjp_ig3402_scaffold_2641_18
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(11312..13660)
DNA (2349bp) protein (783aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS73317.1}; Flags: Fragment;; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
Putative uncharacterized protein id=4968544 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin rbh
Tetratricopeptide TPR_2
bjp_ig3402_scaffold_2641_19
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(13653..14015)
DNA (363bp) protein (121aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
bjp_ig3402_scaffold_2641_20
R_OP11_Roizmanbacteria_37_12, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(14196..14432)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D484_9BACT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_37_12_curated
hypothetical protein
bjp_ig3402_scaffold_2641_21
R_RIF_OD1_10_43_37, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(14588..14908)
DNA (321bp) protein (107aa)
A540L (Fragment) Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_43_37_curated
Displaying 21 items

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