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bjp_ig3402_scaffold_2951

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_2951_1
GWB1_OP11_39_10, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(78..1526)
DNA (1449bp) protein (483aa)
Modification methylase protein {ECO:0000313|EMBL:KKQ91329.1}; TaxID=1618572 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_39_10.;"
DNA modification methylase id=4838919 bin=GWC2_OD1_43_27 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
DNA modification methylase
bjp_ig3402_scaffold_2951_2
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(1595..2695)
DNA (1101bp) protein (367aa)
spoVE; stage V sporulation protein E Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
spoVE; stage V sporulation protein E; K03588 cell division protein FtsW id=5803520 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
stage V sporulation protein E
bjp_ig3402_scaffold_2951_3
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(2692..4404)
DNA (1713bp) protein (571aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] id=5803435 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
stage V sporulation protein D (EC:2.4.1.129)
bjp_ig3402_scaffold_2951_4
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(4411..4725)
DNA (315bp) protein (105aa)
transmembrane_regions Tax=CG_Nomura_03
transmembrane_regions id=5803434 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
bjp_ig3402_scaffold_2951_5
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(4734..5639)
DNA (906bp) protein (302aa)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] id=5803433 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
Ribosomal RNA small subunit methyltransferase H Tax=GWB1_OD1_43_8
S-adenosyl-methyltransferase MraW
bjp_ig3402_scaffold_2951_6

Not on your lists

comp(5641..6075)
DNA (435bp) protein (145aa)
Protein MraZ {ECO:0000313|EMBL:KKR59081.1}; TaxID=1618924 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_40_31.;"
Protein mraZ id=3152174 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
protein mraZ
bjp_ig3402_scaffold_2951_7
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(6500..7966)
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037C5D03
Lysine--tRNA ligase Tax=GWB1_OD1_43_8
lysyl-tRNA synthetase
bjp_ig3402_scaffold_2951_8
unknown

Not on your lists

comp(8064..8174)
DNA (111bp) protein (37aa)

This feature has no annotations

bjp_ig3402_scaffold_2951_9
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(8313..8723)
DNA (411bp) protein (137aa)
Transcriptional regulator, PaaX family {ECO:0000313|EMBL:KKT20792.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
ORF13 id=4731751 bin=GWC2_OD1_43_27 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
PaaX family transcriptional regulator
bjp_ig3402_scaffold_2951_10
GWF2_OD1_40_10, Parcubacteria, Bacteria

Not on your lists

comp(8916..10595)
DNA (1680bp) protein (560aa)
Penicillin-binding protein 2 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYG2_9BACT rbh
Cell division protein ftsi/penicillin-binding protein 2 {ECO:0000313|EMBL:KKR37887.1}; TaxID=1618964 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_40_10.;"
mrdA; penicillin-binding protein 2
bjp_ig3402_scaffold_2951_11
OD1_GWC2_34_28, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10597..10809)
DNA (213bp) protein (71aa)
seg id=5803381 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
seg Tax=OD1_GWC2_34_28
bjp_ig3402_scaffold_2951_12
unknown

Not on your lists

10976..11131
DNA (156bp) protein (52aa)

This feature has no annotations

bjp_ig3402_scaffold_2951_13
RLO_PLX_64_10, Bacteria

Not on your lists

comp(11426..11695)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QR50_NOSS7
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
bjp_ig3402_scaffold_2951_14

Not on your lists

comp(11735..12523)
DNA (789bp) protein (263aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS58121.1}; TaxID=1618823 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_35.;"
transmembrane_regions id=5226933 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rod shape-determining protein MreC
bjp_ig3402_scaffold_2951_15
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(12501..13553)
DNA (1053bp) protein (351aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins id=5803379 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rod shape-determining protein MreB
bjp_ig3402_scaffold_2951_16
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists


comp(13572..14852)
DNA (1281bp) protein (427aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15) Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Proline--tRNA ligase n=1 Tax=Turicibacter sp. PC909 RepID=D4W313_9FIRM id=89237 bin=ACD5 species=Turicibacter sanguinis genus=Turicibacter taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=ACD5 organism_group=OD1-i organism_desc=OD1-i rbh
Prolyl-tRNA synthetase
bjp_ig3402_scaffold_2951_17
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(14885..15937)
DNA (1053bp) protein (351aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000364C39C
membrane-associated zinc metalloprotease
bjp_ig3402_scaffold_2951_18
Parcubacteria bacterium GW2011_GWB2_40_8, Parcubacteria, Bacteria

Not on your lists

comp(15937..16434)
DNA (498bp) protein (166aa)
Ribosome-recycling factor n=1 Tax=uncultured bacterium RepID=K2FD80_9BACT
Ribosome-recycling factor {ECO:0000313|EMBL:KKR74866.1}; TaxID=1618890 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB2_40_8.;"
ribosome recycling factor
bjp_ig3402_scaffold_2951_19
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(16498..17226)
DNA (729bp) protein (243aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] id=5803600 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
holB; DNA polymerase III, delta prime subunit (EC:2.7.7.7)
Putative uncharacterized protein Tax=GWB1_OD1_43_8
bjp_ig3402_scaffold_2951_20

Not on your lists

comp(17242..19548)
DNA (2307bp) protein (769aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=77133 species="Bacteria; environment
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=uncultured bacterium RepID=K2DXX2_9BACT rbh
Displaying 20 items

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