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bjp_ig3402_scaffold_9155

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_9155_1
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

1..165
DNA (165bp) protein (55aa)
DNA polymerase beta subunit id=130488 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein Tax=CG_CPR01_01
bjp_ig3402_scaffold_9155_2
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

149..574
DNA (426bp) protein (142aa)
HEPN domain-containing protein id=130472 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Putative uncharacterized protein Tax=GWE1_OD1_ACD7_35_17
HEPN domain-containing protein
bjp_ig3402_scaffold_9155_3
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

716..1045
DNA (330bp) protein (110aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Putative uncharacterized protein id=4447213 bin=GWC2_Planctomycete_KSU_39_26 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
bjp_ig3402_scaffold_9155_4
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

994..1623
DNA (630bp) protein (210aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Putative uncharacterized protein id=2201938 bin=GWB2_CP_45_9 species=Bacteroides ovatus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
hypothetical protein
bjp_ig3402_scaffold_9155_5
RBG_13_RIF_OD1_08_40_8_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

1715..2095
DNA (381bp) protein (127aa)
fibronectin type III domain-containing protein Tax=RBG_13_RIF_OD1_08_40_8_curated
fibronectin, type III domain-containing protein id=17136 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
fibronectin type III domain-containing protein
bjp_ig3402_scaffold_9155_6
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2161..3357
DNA (1197bp) protein (399aa)
fibronectin type III domain protein Tax=GWB2_Desulfobacterales_56_26_curated
hypothetical protein id=15190020 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
chemotaxis protein
bjp_ig3402_scaffold_9155_7
unknown

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comp(3973..4083)
DNA (111bp) protein (37aa)

This feature has no annotations

bjp_ig3402_scaffold_9155_8
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists


5924..6379
DNA (456bp) protein (152aa)
30S ribosomal protein S6 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
30S ribosomal protein S6 id=4790087 bin=GWC2_OD1_43_27 species=Helicobacter bizzozeronii genus=Helicobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
bjp_ig3402_scaffold_9155_9
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

6384..6824
DNA (441bp) protein (147aa)
ssDNA-binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
single-strand binding protein; K03111 single-strand DNA-binding protein id=5803295 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ssb; single-stranded DNA-binding protein
bjp_ig3402_scaffold_9155_10
Geobacillus sp. Y4.1MC1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7096..7737)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036312C9
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:ADP76496.1}; TaxID=581103 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacill
bjp_ig3402_scaffold_9155_11
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

7839..9362
DNA (1524bp) protein (508aa)
hpaIM; Modification methylase HpaI Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
BstYI methyltransferase id=2026715 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hpaIM; Modification methylase HpaI
bjp_ig3402_scaffold_9155_12
R_OD1_Yanofskybacteria_41_21, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(9354..10052)
DNA (699bp) protein (233aa)
type II restriction enzyme TaqI (EC:3.1.21.4) Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_41_21_curated
Type II site-specific deoxyribonuclease n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A9M3_THEAQ
type II restriction enzyme TthHB8I
bjp_ig3402_scaffold_9155_trna_1
unknown

Not on your lists

comp(10055..10125)
DNA (71bp)
transferRNA
bjp_ig3402_scaffold_9155_13
unknown

Not on your lists

10533..10793
DNA (261bp) protein (87aa)

This feature has no annotations

bjp_ig3402_scaffold_9155_14

Not on your lists

10790..11434
DNA (645bp) protein (215aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT92254.1}; TaxID=1618832 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_45_14.;"
seg 43..53 id=86489 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
bjp_ig3402_scaffold_9155_15
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

11727..12266
DNA (540bp) protein (180aa)
hypothetical protein Tax=RBG_13_RIF_OD1_07_37_56_curated
protein of unknown function DUF88 id=131653 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Displaying 16 items

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