ggKbase home page

bjp_ig3402_scaffold_10009

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_10009_1
unknown

Not on your lists

comp(3..110)
DNA (108bp) protein (36aa)

This feature has no annotations

bjp_ig3402_scaffold_10009_2
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

comp(170..1012)
DNA (843bp) protein (281aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] id=5803556 bin=OD1_GWC2_34_28 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
dacB1; D-alanyl-D-alanine carboxypeptidase DacB (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
bjp_ig3402_scaffold_10009_3
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

comp(966..1508)
DNA (543bp) protein (181aa)
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
scpB; segregation and condensation protein B; K06024 segregation and condensation protein B id=5803557 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
transcriptional regulator containing the HTH domain
bjp_ig3402_scaffold_10009_4
GWF2_OD1_40_10, Parcubacteria, Bacteria

Not on your lists

comp(1495..2292)
DNA (798bp) protein (266aa)
Segregation and condensation protein A {ECO:0000313|EMBL:KKR39046.1}; TaxID=1618964 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_40_10.;"
scpA; segregation and condensation protein A; K05896 segregation and condensation protein A id=5803558 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
bjp_ig3402_scaffold_10009_5
RLO_RIF_OD1_02_44_15, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(2237..2926)
DNA (690bp) protein (230aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_02_44_15_curated
Transposase id=4901177 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
bjp_ig3402_scaffold_10009_6
unknown

Not on your lists

3094..3519
DNA (426bp) protein (142aa)

This feature has no annotations

bjp_ig3402_scaffold_10009_7
unknown

Not on your lists

comp(4019..4345)
DNA (327bp) protein (109aa)

This feature has no annotations

bjp_ig3402_scaffold_10009_8
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

comp(4650..5027)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI0003810198
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
hypothetical protein
bjp_ig3402_scaffold_10009_9
R_RIF_OD1_07_48_27b, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

5071..5292
DNA (222bp) protein (74aa)
hypothetical protein
cspA; cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_48_27b_curated
Cold shock-like protein id=2669951 bin=GWA1_ZB2_49_26 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
bjp_ig3402_scaffold_10009_10
R_RIF_OD1_09_54_12, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists


comp(5487..6887)
DNA (1401bp) protein (467aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_54_12_curated
Aspartyl-tRNA synthetase id=1947782 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria) rbh
aspartyl-tRNA synthetase
bjp_ig3402_scaffold_10009_11
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(6893..8011)
DNA (1119bp) protein (373aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] id=5803519 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
bjp_ig3402_scaffold_10009_12
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8155..8898)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z549_FLABF
hypothetical protein Tax=RBG_13_Deltaproteobacteria_52_11_curated
hypothetical protein
bjp_ig3402_scaffold_10009_13
unknown

Not on your lists

comp(8916..9095)
DNA (180bp) protein (60aa)

This feature has no annotations

bjp_ig3402_scaffold_10009_14
unknown

Not on your lists

comp(9092..9313)
DNA (222bp) protein (74aa)

This feature has no annotations

bjp_ig3402_scaffold_10009_15
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists

comp(9396..10166)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GYY4_UNCTG rbh
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
hypothetical protein
bjp_ig3402_scaffold_10009_16
R_OD1_Kaiserbacteria_59_21, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10229..10813)
DNA (585bp) protein (195aa)
Homeodomain-like domain protein n=12 Tax=Leptospira RepID=M6YIU8_9LEPT
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_59_21_curated
transposase
bjp_ig3402_scaffold_10009_17
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(10771..11265)
DNA (495bp) protein (165aa)
IS630 family transposase Tax=RBG_13_Planctomycetes_60_9_curated
IS630 family transposase id=14624115 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
transposase ISLbp6
Displaying 17 items

View Taxonomy