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bjp_ig3402_scaffold_3126

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_3126_1
GWF2_OD1_42_19, Giovannonibacteria, Parcubacteria, Bacteria

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2..514
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037C730D
Transposase Tax=GWF2_OD1_42_19
transposase
bjp_ig3402_scaffold_3126_2
GWB1_OD1_43_8, Parcubacteria, Bacteria

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comp(547..1044)
DNA (498bp) protein (166aa)
peptide deformylase (EC:3.5.1.88)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q076_9BACT
Peptide deformylase {ECO:0000313|EMBL:KKT21302.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
bjp_ig3402_scaffold_3126_3
GWB1_OD1_43_8, Parcubacteria, Bacteria

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comp(1057..2928)
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW18_9BACT rbh
Primosomal protein N Tax=GWB1_OD1_43_8
primosomal protein N'
bjp_ig3402_scaffold_3126_4
RLO_OD1_41_13, Parcubacteria, Bacteria

Not on your lists

comp(2930..3706)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003798341
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
bjp_ig3402_scaffold_3126_5
GWB1_OD1_43_8, Parcubacteria, Bacteria

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3860..4138
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003644974
Transcriptional regulator, PaaX family {ECO:0000313|EMBL:KKT21396.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
bjp_ig3402_scaffold_3126_6
GWB1_OD1_43_8, Parcubacteria, Bacteria

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4164..4316
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003644974
Transcriptional regulator, PaaX family {ECO:0000313|EMBL:KKT21396.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
bjp_ig3402_scaffold_3126_7
unknown

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comp(4459..4620)
DNA (162bp) protein (54aa)

This feature has no annotations

bjp_ig3402_scaffold_3126_8
GWB1_OD1_43_8, Parcubacteria, Bacteria

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4807..6078
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI0003699FC0
Transcriptional regulator, XRE family {ECO:0000313|EMBL:KKT18648.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
bjp_ig3402_scaffold_3126_9
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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6063..7076
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYT3_9BACT rbh
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
cell shape determining protein, MreB/Mrl family
bjp_ig3402_scaffold_3126_10
unknown

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7196..7432
DNA (237bp) protein (79aa)

This feature has no annotations

bjp_ig3402_scaffold_3126_11
R_OD1_Wolfebacteria_41_13b, Wolfebacteria, Parcubacteria, Bacteria

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7639..8211
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037781BA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_41_13b_curated
membrane protein
bjp_ig3402_scaffold_3126_12
GWB1_OD1_43_8, Parcubacteria, Bacteria

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comp(8195..9031)
DNA (837bp) protein (279aa)
Probable endonuclease 4 n=1 Tax=uncultured bacterium RepID=K2EME4_9BACT rbh
Probable endonuclease 4 Tax=GWB1_OD1_43_8
apurinic endonuclease Apn1
bjp_ig3402_scaffold_3126_13

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9092..9616
DNA (525bp) protein (175aa)
CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase {ECO:0000313|EMBL:KKP98364.1}; TaxID=1618919 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_36_17.;"
CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase id=3152158 bin=GWC1_OD1_38_17 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
pgsA2; Phosphatidylglycerophosphate synthase
bjp_ig3402_scaffold_3126_14
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

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9667..10530
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000362D291
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=RBG_13_RIF_OD1_07_42_11_curated
putative GTP-binding protein
bjp_ig3402_scaffold_3126_15
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

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comp(10641..11300)
DNA (660bp) protein (220aa)
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX); K02616 phenylacetic acid degradation operon negative regulatory protein Tax=RIFCSPHIGHO2_01_FULL_OD
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway related protein (PaaX); K02616 phenylacetic acid degradation operon negative regulatory protein id=3267 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
phaN; repressor
bjp_ig3402_scaffold_3126_16
GWA2_OD1_42_18, Parcubacteria, Bacteria

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11441..13003
DNA (1563bp) protein (521aa)
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:KKS45366.1}; TaxID=1618821 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_18.;"
RND family efflux transporter MFP subunit id=5803398 bin=OD1_GWC2_34_28 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RND family efflux transporter, MFP subunit
bjp_ig3402_scaffold_3126_17
GWC2_OD1_41_9, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

13111..13830
DNA (720bp) protein (240aa)
Putative transporter subunit: ATP-binding component of ABC superfamily Tax=GWC2_OD1_41_9
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein id=5802298 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) rbh
antimicrobial peptide ABC transporter ATPase
bjp_ig3402_scaffold_3126_18
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

13833..14462
DNA (630bp) protein (210aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
Putative uncharacterized protein id=3736881 bin=GWC2_OD1_43_27 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
Displaying 18 items

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