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bjp_ig3402_scaffold_6791

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_6791_1
R_RIF_OD1_05_38_8, RIF-OD1-5, Parcubacteria, Bacteria

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comp(3..293)
DNA (291bp) protein (97aa)
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_05_38_8_curated
LSU ribosomal protein L24P id=15190542 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
50S ribosomal protein L24
bjp_ig3402_scaffold_6791_2

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comp(290..610)
DNA (321bp) protein (107aa)
50S ribosomal protein L14 {ECO:0000313|EMBL:KKR59814.1}; TaxID=1618924 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_40_31.;"
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5803321 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L14
bjp_ig3402_scaffold_6791_3

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comp(1056..1706)
DNA (651bp) protein (217aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GW03_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:AGT99730.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
SSU ribosomal protein S3P
bjp_ig3402_scaffold_6791_4
R_RIF_OD1_05_43_15b, RIF-OD1-5, Parcubacteria, Bacteria

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comp(1709..2083)
DNA (375bp) protein (125aa)
50S ribosomal protein L22 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFD1_THET1
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_05_43_15b_curated
50S ribosomal protein L22
bjp_ig3402_scaffold_6791_5

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comp(2085..2387)
DNA (303bp) protein (101aa)
Ribosomal protein S19 {ECO:0000313|EMBL:KKR47409.1}; TaxID=1618815 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_143.;"
Ribosomal protein S19 id=3736630 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
30S ribosomal protein S19
bjp_ig3402_scaffold_6791_6
GWF2_OD1_40_10, Parcubacteria, Bacteria

Not on your lists


comp(2389..3222)
DNA (834bp) protein (278aa)
50S ribosomal protein L2 {ECO:0000313|EMBL:KKR38089.1}; TaxID=1618964 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_40_10.;"
Translation protein SH3-like id=5802990 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
50S ribosomal protein L2
bjp_ig3402_scaffold_6791_7
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists


comp(3225..3584)
DNA (360bp) protein (120aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=5227351 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplW; 50S ribosomal protein L23
bjp_ig3402_scaffold_6791_8
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

Not on your lists

comp(3917..5005)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C2M6_THEGP
hypothetical protein; K14109 energy-converting hydrogenase A subunit R Tax=RBG_13_OP11_40_15_curated
hypothetical protein
bjp_ig3402_scaffold_6791_9
R_RIF_OD1_11_45_35, RIF-OD1-11, Parcubacteria, Bacteria

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comp(5391..5570)
DNA (180bp) protein (60aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_45_35_curated
bjp_ig3402_scaffold_6791_10
unknown

Not on your lists

comp(5571..6080)
DNA (510bp) protein (170aa)

This feature has no annotations

bjp_ig3402_scaffold_6791_11
R_RIF_OD1_07_47_27, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(6124..6816)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=unclassified candidate division OP9 RepID=UPI0003658B7D
HhH-GPD family protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_47_27_curated
HhH-GPD family protein
bjp_ig3402_scaffold_6791_trna_1
unknown

Not on your lists

comp(6982..7053)
DNA (72bp)
transferRNA
bjp_ig3402_scaffold_6791_12
GWA1_OD1_Jorgensenbacteria_54_12_curated, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7044..7307)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A4N2_9BACT
putative endonuclease containing a URI domain Tax=GWA1_OD1_Jorgensenbacteria_54_12_curated
bjp_ig3402_scaffold_6791_13

Not on your lists

comp(7441..9333)
DNA (1893bp) protein (631aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000313|EMBL:KKR47477.1}; TaxID=1618815 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_143.;"
ATP-dependent zinc metalloprotease FtsH id=3736471 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) rbh
HflB3; ATP-dependent Zn protease
bjp_ig3402_scaffold_6791_14
R_OD1_Giovannonibacteria_44_16, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(9408..10103)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035DE755
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_44_16_curated
hypothetical protein
bjp_ig3402_scaffold_6791_15
unknown

Not on your lists

comp(10188..10448)
DNA (261bp) protein (87aa)

This feature has no annotations

bjp_ig3402_scaffold_6791_16

Not on your lists

10543..10791
DNA (249bp) protein (83aa)
SsrA-binding protein {ECO:0000313|EMBL:KKS34689.1}; TaxID=1618927 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_13.;"
SsrA-binding protein id=4731743 bin=GWC2_OD1_43_27 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
smpB; SsrA-binding protein
Displaying 17 items

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