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bjp_ig3402_scaffold_3571

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_3571_1
R_OD1_Nomurabacteria_40_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(4..696)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXY0_9PROT
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_40_18_curated
bjp_ig3402_scaffold_3571_2
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

comp(717..1694)
DNA (978bp) protein (326aa)
det:DET0570 prfB; peptide chain release factor 2, programmed frameshift; K02836 peptide chain release factor RF-2 id=13143 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
hypothetical protein
Tax=BJP_IG2158_OD1_28_51
bjp_ig3402_scaffold_3571_3
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

2078..3592
DNA (1515bp) protein (505aa)
lytR3; transcriptional regulator id=99266 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
putative LytR family transcriptional protein
Tax=BJP_IG2158_OD1_28_51
bjp_ig3402_scaffold_3571_4
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

3650..5041
DNA (1392bp) protein (464aa)
GTPase Der n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R7W3_9THEO
engA; GTP-binding protein EngA
Tax=BJP_IG2158_OD1_28_51
bjp_ig3402_scaffold_3571_5
Spiroplasma diminutum, Spiroplasma, Entomoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

5229..5705
DNA (477bp) protein (159aa)
RNA polymerase sigma factor n=1 Tax=Spiroplasma diminutum CUAS-1 RepID=S5M0B6_9MOLU
rpoD; RNA polymerase sigma factor RpoD
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1276221 species="Bacteria; Tenericutes; Mollicutes; Entomoplasmatales; Spiroplasmataceae; Spiroplasma.;" source="Spiroplasma diminutu
bjp_ig3402_scaffold_3571_6
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

6013..6201
DNA (189bp) protein (63aa)
Tax=BJP_IG2158_OD1_28_51
bjp_ig3402_scaffold_3571_7
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

6510..6941
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CAD5_9BACT
Protein of unknown function DUF88
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
bjp_ig3402_scaffold_3571_8
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

7069..7635
DNA (567bp) protein (189aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase id=2720344 bin=GWA1_ZB2_49_26 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=BJP_IG2158_OD1_28_51
bjp_ig3402_scaffold_3571_trna_3
unknown

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comp(7794..7865)
DNA (72bp)
transferRNA
bjp_ig3402_scaffold_3571_trna_1
unknown

Not on your lists

9172..9244
DNA (73bp)
transferRNA
bjp_ig3402_scaffold_3571_9
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

9879..11009
DNA (1131bp) protein (377aa)
DNA polymerase III subunit beta id=1807452 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
dnaN; DNA polymerase III subunit beta
Tax=BJP_IG2158_OD1_28_51
bjp_ig3402_scaffold_3571_10
R_OD1_Uhrbacteria_54_37, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

11579..11911
DNA (333bp) protein (111aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_54_37_curated
hypothetical protein id=85888 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
bjp_ig3402_scaffold_3571_11
R_OD1_Uhrbacteria_54_37, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

11896..12156
DNA (261bp) protein (87aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_54_37_curated
bjp_ig3402_scaffold_3571_12
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

comp(12219..15131)
DNA (2913bp) protein (971aa)
Penicillin-binding protein, 1A family id=1807451 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) rbh
hypothetical protein
Tax=BJP_IG2158_OD1_28_51
bjp_ig3402_scaffold_3571_13
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

15438..15923
DNA (486bp) protein (162aa)
Membrane protein, GtrA superfamily id=3012784 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
membrane protein, GtrA superfamily
Tax=BJP_IG2158_OD1_28_51
bjp_ig3402_scaffold_3571_trna_2
unknown

Not on your lists

comp(15967..16055)
DNA (89bp)
transferRNA
bjp_ig3402_scaffold_3571_14
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

comp(16042..17307)
DNA (1266bp) protein (422aa)
predicted DNA methylase id=1816781 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=BJP_IG2158_OD1_28_51
bjp_ig3402_scaffold_3571_15
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists


17557..17982
DNA (426bp) protein (142aa)
30S ribosomal protein S6 id=1816778 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
rpsF; 30S ribosomal protein S6
Tax=BJP_IG2158_OD1_28_51
bjp_ig3402_scaffold_3571_16
unknown

Not on your lists

18209..18301
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 19 items

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