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ACD49_1

Alias: ACD49_1302.68609.23

Search features with annotation key words

Displaying items 31-60 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD49_1_31
ACD49, Gracilibacteria, Bacteria

Not on your lists

26025..27587
DNA (1563bp) protein (521aa)
26025..27587 + (rbs_motif=TTTTAA rbs_spacer=11bp)
hypothetical protein Tax=ACD49
ACD49_1_32
ACD49, Gracilibacteria, Bacteria

Not on your lists

27620..29206
DNA (1587bp) protein (529aa)
seg (db=Seg db_id=seg from=472 to=483)
seg 472..483 Tax=ACD49
ACD49_1_33
ACD49, Gracilibacteria, Bacteria

Not on your lists

29235..31046
DNA (1812bp) protein (604aa)
seg (db=Seg db_id=seg from=181 to=196)
seg 181..196 Tax=ACD49
ACD49_1_34
unknown

Not on your lists

31049..31780
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XF43_9RHOB (db=UNIREF evalue=6.0e-27 bit_score=124.0 identity=32.14 coverage=89.344262295082)
hypothetical protein (db=KEGG evalue=2.0e-19 bit_score=99.8 identity=30.37 coverage=85.2459016393443)
BtpA (db=HMMPfam db_id=PF03437 from=155 to=235 evalue=5.7e-06 interpro_id=IPR005137 interpro_description=Photosystem I assembly BtpA)
Putative uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XF43_9RHOB Tax=ACD49
ACD49_1_35
ACD49, Gracilibacteria, Bacteria

Not on your lists

31806..32708
DNA (903bp) protein (301aa)
31806..32708 + (rbs_motif=TTTAA rbs_spacer=10bp)
hypothetical protein Tax=ACD49
ACD49_1_36
ACD49, Gracilibacteria, Bacteria

Not on your lists

32726..33304
DNA (579bp) protein (193aa)
Ham1-like protein (db=KEGG evalue=3.0e-18 bit_score=94.4 identity=30.57 coverage=91.7098445595855)
Ham1-like protein n=1 Tax=Frankia sp. CcI3 RepID=Q2JAE0_FRASC (db=UNIREF evalue=3.0e-18 bit_score=94.4 identity=30.57 coverage=91.7098445595855)
ITPase-like (db=superfamily db_id=SSF52972 from=2 to=191 evalue=1.3e-27)
Ham1p_like (db=HMMPfam db_id=PF01725 from=4 to=189 evalue=1.4e-25 interpro_id=IPR002637 interpro_description=Ham1-like protein GO=Molecular Function: hydrolase activity (GO:0016787))
ACD49_1_37
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(33315..34760)
DNA (1446bp) protein (482aa)
seg (db=Seg db_id=seg from=449 to=466)
seg (db=Seg db_id=seg from=358 to=374)
seg (db=Seg db_id=seg from=229 to=245)
seg 229..245 Tax=ACD49
ACD49_1_38
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(34779..38204)
DNA (3426bp) protein (1142aa)
ATPase associated with various cellular activities AAA_5 (db=KEGG evalue=8.0e-08 bit_score=63.9 identity=26.21 coverage=23.1173380035026)
ATPase associated with various cellular activities AAA_5 n=2 Tax=Hydrogenobaculum RepID=B4U679_HYDS0 (db=UNIREF evalue=8.0e-08 bit_score=63.9 identity=26.21 coverage=23.1173380035026)
seg (db=Seg db_id=seg from=499 to=511)
seg (db=Seg db_id=seg from=564 to=578)
ACD49_1_39
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(38232..40616)
DNA (2385bp) protein (795aa)
seg (db=Seg db_id=seg from=36 to=45)
seg (db=Seg db_id=seg from=131 to=147)
seg (db=Seg db_id=seg from=402 to=416)
seg (db=Seg db_id=seg from=511 to=527)
ACD49_1_40

Not on your lists

40784..41161
DNA (378bp) protein (126aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=54 to=86 evalue=NA)
seg (db=Seg db_id=seg from=61 to=74)
seg (db=Seg db_id=seg from=107 to=117)
ACD49_1_41
ACD49, Gracilibacteria, Bacteria

Not on your lists

41193..43088
DNA (1896bp) protein (632aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=254 to=276)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=115)
seg (db=Seg db_id=seg from=556 to=566)
seg (db=Seg db_id=seg from=179 to=191)
ACD49_1_42
ACD49, Gracilibacteria, Bacteria

Not on your lists

43098..43682
DNA (585bp) protein (195aa)
43098..43682 + (rbs_motif=TTTTAA rbs_spacer=3bp)
hypothetical protein Tax=ACD49
ACD49_1_43
ACD49, Gracilibacteria, Bacteria

Not on your lists

43684..44532
DNA (849bp) protein (283aa)
type IV fimbrial biogenesis protein, prepilin cysteine protease (c20) pild (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] (db=KEGG evalue=3.0e-15 bit_score=85.9 identity=48.81 coverage=28.9752650176678)
transmembrane_regions (db=TMHMM db_id=tmhmm from=259 to=281)
transmembrane_regions (db=TMHMM db_id=tmhmm from=224 to=246)
transmembrane_regions (db=TMHMM db_id=tmhmm from=202 to=220)
ACD49_1_44
unknown

Not on your lists


44621..45151
DNA (531bp) protein (177aa)
50S ribosomal protein L7/L12 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B21A2 (db=UNIREF evalue=1.0e-16 bit_score=89.0 identity=33.7 coverage=94.3502824858757)
seg (db=Seg db_id=seg from=103 to=115)
50S ribosomal protein L7/L12 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B21A2 Tax=ACD49
50S ribosomal protein L7/L12
ACD49_1_45
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(45200..46345)
DNA (1146bp) protein (382aa)
Malate dehydrogenase (Oxaloacetate-decarboxylating) n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CE92_KOSOT (db=UNIREF evalue=5.0e-131 bit_score=471.0 identity=61.32 coverage=98.6910994764398)
Malate dehydrogenase (oxaloacetate-decarboxylating) (EC:1.1.1.38)
Malate dehydrogenase (oxaloacetate-decarboxylating) (EC:1.1.1.38)
MALIC ENZYME (db=HMMPanther db_id=PTHR23406:SF2 from=8 to=378 evalue=3.2e-105)
ACD49_1_46
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(46463..47830)
DNA (1368bp) protein (456aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=164 to=178)
seg (db=Seg db_id=seg from=132 to=151)
seg (db=Seg db_id=seg from=15 to=37)
ACD49_1_47

Not on your lists

comp(47924..49867)
DNA (1944bp) protein (648aa)
hypothetical protein
hypothetical protein
Metallo-beta-lactamase superfamily protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EB02_MACCJ (db=UNIREF evalue=3.0e-104 bit_score=383.0 identity=37.48 coverage=85.0308641975309)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=93 to=516 evalue=4.9e-35)
ACD49_1_48
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(50043..50864)
DNA (822bp) protein (274aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=29)
Metalloproteases ("zincins"), catalytic domain (db=superfamily db_id=SSF55486 from=47 to=231 evalue=6.6e-07)
transmembrane_regions 12..29 Tax=ACD49
hypothetical protein
ACD49_1_49
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(50869..51312)
DNA (444bp) protein (148aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=121 to=143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=106)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
seg (db=Seg db_id=seg from=4 to=13)
ACD49_1_50
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(51318..51797)
DNA (480bp) protein (160aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=134 to=156)
transmembrane_regions (db=TMHMM db_id=tmhmm from=97 to=119)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions 15..37 Tax=ACD49
ACD49_1_51
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(51800..52186)
DNA (387bp) protein (129aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=91)
transmembrane_regions (db=TMHMM db_id=tmhmm from=100 to=122)
transmembrane_regions 12..34 Tax=ACD49
ACD49_1_52
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(52174..52659)
DNA (486bp) protein (162aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=135 to=157)
transmembrane_regions (db=TMHMM db_id=tmhmm from=100 to=122)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=132 to=144)
ACD49_1_53
ACD49, Gracilibacteria, Bacteria

Not on your lists

52737..53129
DNA (393bp) protein (131aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=106 to=128)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
seg (db=Seg db_id=seg from=7 to=27)
seg (db=Seg db_id=seg from=40 to=57)
ACD49_1_54
ACD49, Gracilibacteria, Bacteria

Not on your lists

53170..53391
DNA (222bp) protein (74aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
SecG (db=HMMPfam db_id=PF03840 from=4 to=72 evalue=8.2e-10 interpro_id=IPR004692 interpro_description=Preprotein translocase SecG subunit GO=Biological Process: protein secretion (GO:0009306), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450), Cellular Component: integral to membrane (GO:0016021))
secG: preprotein translocase, SecG subunit (db=HMMTigr db_id=TIGR00810 from=2 to=73 evalue=0.00012 interpro_id=IPR004692 interpro_description=Preprotein translocase SecG subunit GO=Biological Process: protein secretion (GO:0009306), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450), Cellular Component: integral to membrane (GO:0016021))
ACD49_1_55
ACD49, Gracilibacteria, Bacteria

Not on your lists

53465..55561
DNA (2097bp) protein (699aa)
seg (db=Seg db_id=seg from=227 to=238)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=491 to=671 evalue=1.0e-15)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=20 to=273 evalue=1.7e-14)
no description (db=Gene3D db_id=G3DSA:3.90.76.10 from=26 to=179 evalue=2.9e-09)
ACD49_1_56

Not on your lists

55564..56463
DNA (900bp) protein (300aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=248 to=270)
transmembrane_regions (db=TMHMM db_id=tmhmm from=219 to=241)
transmembrane_regions (db=TMHMM db_id=tmhmm from=155 to=177)
transmembrane_regions (db=TMHMM db_id=tmhmm from=126 to=148)
ACD49_1_57
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(56642..57040)
DNA (399bp) protein (133aa)
suf system fes assembly protein, NifU family; K04488 nitrogen fixation protein NifU and related proteins (db=KEGG evalue=6.0e-09 bit_score=63.2 identity=33.9 coverage=85.7142857142857)
SufE/NifU (db=superfamily db_id=SSF82649 from=3 to=122 evalue=2.6e-19)
no description (db=Gene3D db_id=G3DSA:3.90.1010.10 from=1 to=131 evalue=3.2e-15)
NifU_N (db=HMMPfam db_id=PF01592 from=7 to=120 evalue=8.6e-09 interpro_id=IPR002871 interpro_description=NIF system FeS cluster assembly, NifU, N-terminal GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: iron-sulfur cluster assembly (GO:0016226), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD49_1_58
ACD49, Gracilibacteria, Bacteria

Not on your lists

57189..58655
DNA (1467bp) protein (489aa)
seg (db=Seg db_id=seg from=18 to=35)
seg (db=Seg db_id=seg from=200 to=214)
seg (db=Seg db_id=seg from=239 to=258)
seg (db=Seg db_id=seg from=457 to=477)
ACD49_1_59
ACD49, Gracilibacteria, Bacteria

Not on your lists

58659..59255
DNA (597bp) protein (199aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=9 to=24)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=4 to=27 evalue=0.025 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
transmembrane_regions 7..29 Tax=ACD49
ACD49_1_60
ACD49, Gracilibacteria, Bacteria

Not on your lists

59274..63185
DNA (3912bp) protein (1304aa)
DNA polymerase III, alpha subunit n=1 Tax=Ammonifex degensii KC4 RepID=C9RBG0_AMMDK (db=UNIREF evalue=0.0 bit_score=752.0 identity=40.15 coverage=73.6963190184049)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
seg (db=Seg db_id=seg from=285 to=304)
Displaying items 31-60 of 62 in total

View Taxonomy