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ACD49_1

Alias: ACD49_1302.68609.23

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD49_1_1
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(2..118)
DNA (117bp) protein (39aa)
2..118 - (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=ACD49
ACD49_1_2
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(131..1582)
DNA (1452bp) protein (484aa)
seg (db=Seg db_id=seg from=12 to=20)
seg (db=Seg db_id=seg from=34 to=48)
seg 12..20 Tax=ACD49
ACD49_1_3
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(1655..2374)
DNA (720bp) protein (240aa)
seg (db=Seg db_id=seg from=122 to=133)
seg 122..133 Tax=ACD49
ACD49_1_4
ACD49, Gracilibacteria, Bacteria

Not on your lists

2696..3292
DNA (597bp) protein (199aa)
HAD-superfamily hydrolase, subfamily IA, variant 3
HAD-like (db=superfamily db_id=SSF56784 from=6 to=197 evalue=2.5e-29)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=87 to=186 evalue=5.4e-19)
HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN CONTAINING 3 (db=HMMPanther db_id=PTHR12725:SF5 from=88 to=182 evalue=1.2e-15)
ACD49_1_5

Not on your lists

3403..3633
DNA (231bp) protein (77aa)
hypothetical protein
DUF2132 (db=HMMPfam db_id=PF09905 from=11 to=69 evalue=2.6e-24 interpro_id=IPR018668 interpro_description=Protein of unknown function DUF2132)
hypothetical protein alias=ACD49_C00001G00005,ACD49_1302.68609.23G0005,ACD49_1302.68609.23_5 id=68588 tax=ACD49 species=Rhodopirellula baltica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes organism_group=BD1-5 organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD66780.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD49_1_6
ACD49, Gracilibacteria, Bacteria

Not on your lists

3697..3891
DNA (195bp) protein (65aa)
3697..3891 + (rbs_motif=TTTTA rbs_spacer=13bp)
hypothetical protein Tax=ACD49
ACD49_1_7
ACD49, Gracilibacteria, Bacteria

Not on your lists

3846..4064
DNA (219bp) protein (73aa)
3846..4064 + (rbs_motif=TAA rbs_spacer=6bp)
hypothetical protein Tax=ACD49
ACD49_1_8
ACD49, Gracilibacteria, Bacteria

Not on your lists

4172..4423
DNA (252bp) protein (84aa)
4172..4423 + (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD49
ACD49_1_9
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(4482..5294)
DNA (813bp) protein (271aa)
seg (db=Seg db_id=seg from=200 to=218)
seg 200..218 Tax=ACD49
ACD49_1_10

Not on your lists

comp(5329..6936)
DNA (1608bp) protein (536aa)
peptidase M23 (db=KEGG evalue=3.0e-11 bit_score=73.9 identity=34.21 coverage=19.589552238806)
seg (db=Seg db_id=seg from=419 to=429)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Duplicated hybrid motif (db=superfamily db_id=SSF51261 from=119 to=235 evalue=4.8e-14 interpro_id=IPR011055 interpro_description=Duplicated hybrid motif)
ACD49_1_11
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(7018..7983)
DNA (966bp) protein (322aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=293 to=312)
transmembrane_regions (db=TMHMM db_id=tmhmm from=269 to=288)
transmembrane_regions (db=TMHMM db_id=tmhmm from=235 to=257)
transmembrane_regions (db=TMHMM db_id=tmhmm from=198 to=220)
ACD49_1_12
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(7984..8184)
DNA (201bp) protein (67aa)
seg (db=Seg db_id=seg from=3 to=15)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg 3..15 Tax=ACD49
ACD49_1_13
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(8272..9540)
DNA (1269bp) protein (423aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
AROM/DEHYDROQUINATE SYNTHASE (db=HMMPanther db_id=PTHR21090 from=69 to=417 evalue=2.7e-82)
UDP-N-ACETYLGLUCOSAMINE ENOLPYRUVYL TRANSFERASE (db=HMMPanther db_id=PTHR21090:SF4 from=69 to=417 evalue=2.7e-82 interpro_id=IPR005750 interpro_description=UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO=Molecular Function: transferase activity (GO:0016740), Biological Process: UDP-N-acetylgalactosamine biosynthetic process (GO:0019277))
EPT/RTPC-like (db=superfamily db_id=SSF55205 from=1 to=420 evalue=1.6e-68 interpro_id=IPR013792 interpro_description=RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO=Molecular Function: catalytic activity (GO:0003824))
ACD49_1_14
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(9674..10015)
DNA (342bp) protein (114aa)
9674..10015 - (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD49
ACD49_1_15
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(10008..10157)
DNA (150bp) protein (50aa)
10008..10157 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD49
ACD49_1_16
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(10289..10870)
DNA (582bp) protein (194aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=15 to=32)
seg 15..32 Tax=ACD49
ACD49_1_17
ACD49, Gracilibacteria, Bacteria

Not on your lists

11065..11457
DNA (393bp) protein (131aa)
coiled-coil (db=Coil db_id=coil from=110 to=131 evalue=NA)
seg (db=Seg db_id=seg from=4 to=18)
seg (db=Seg db_id=seg from=121 to=130)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
ACD49_1_18
ACD49, Gracilibacteria, Bacteria

Not on your lists

11460..12272
DNA (813bp) protein (271aa)
Putative deoxyribonuclease YcfH
coiled-coil (db=Coil db_id=coil from=69 to=90 evalue=NA)
seg (db=Seg db_id=seg from=105 to=117)
TATD_3 (db=PatternScan db_id=PS01091 from=197 to=213 evalue=0.0 interpro_id=IPR018228 interpro_description=Deoxyribonuclease, TatD-related, conserved site GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
ACD49_1_19
ACD49, Gracilibacteria, Bacteria

Not on your lists

12477..12671
DNA (195bp) protein (65aa)
12477..12671 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD49
ACD49_1_20
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(12640..13677)
DNA (1038bp) protein (346aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=160 to=177)
transmembrane_regions (db=TMHMM db_id=tmhmm from=192 to=214)
transmembrane_regions (db=TMHMM db_id=tmhmm from=221 to=238)
transmembrane_regions (db=TMHMM db_id=tmhmm from=253 to=275)
ACD49_1_21
ACD49, Gracilibacteria, Bacteria

Not on your lists

13827..15377
DNA (1551bp) protein (517aa)
diguanylate cyclase/phosphodiesterase
seg (db=Seg db_id=seg from=43 to=56)
EAL domain-like (db=superfamily db_id=SSF141868 from=279 to=508 evalue=1.9e-47)
EAL (db=HMMPfam db_id=PF00563 from=286 to=506 evalue=4.5e-43 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, predicted)
ACD49_1_22
ACD49, Gracilibacteria, Bacteria

Not on your lists


comp(15380..18226)
DNA (2847bp) protein (949aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5R1_9FIRM (db=UNIREF evalue=3.0e-113 bit_score=414.0 identity=50.64 coverage=40.7797681770285)
seg (db=Seg db_id=seg from=832 to=850)
ACD49_1_23
unknown

Not on your lists

comp(18288..18989)
DNA (702bp) protein (234aa)
Heat-inducible transcription repressor HrcA n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5R352_9FIRM (db=UNIREF evalue=2.0e-21 bit_score=105.0 identity=44.19 coverage=53.8461538461538)
hrcA; heat-inducible transcription repressor
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=5 to=88 evalue=6.0e-21 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=4 to=90 evalue=7.2e-21)
ACD49_1_24

Not on your lists

comp(19009..21174)
DNA (2166bp) protein (722aa)
FtsK; DNA translocase FtsK
FtsK; DNA translocase FtsK
Cell divisionFtsK/SpoIIIE n=1 Tax=Clostridium cellulovorans 743B RepID=C5RMC1_CLOCL (db=UNIREF evalue=8.0e-125 bit_score=451.0 identity=47.82 coverage=66.4819944598338)
seg (db=Seg db_id=seg from=207 to=231)
ACD49_1_25
ACD49, Gracilibacteria, Bacteria

Not on your lists

21405..21794
DNA (390bp) protein (130aa)
21405..21794 + (rbs_motif=TTTTAA rbs_spacer=11bp)
hypothetical protein Tax=ACD49
ACD49_1_26
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(21844..22122)
DNA (279bp) protein (93aa)
21844..22122 - (rbs_motif=TTTTAA rbs_spacer=11bp)
hypothetical protein Tax=ACD49
ACD49_1_27
unknown

Not on your lists

comp(22204..23223)
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X101_9GAMM (db=UNIREF evalue=2.0e-16 bit_score=90.1 identity=24.36 coverage=76.1764705882353)
hypothetical protein (db=KEGG evalue=3.0e-15 bit_score=86.3 identity=27.49 coverage=78.5294117647059)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=50)
ACD49_1_28
ACD49, Gracilibacteria, Bacteria

Not on your lists

23431..23949
DNA (519bp) protein (173aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=141 to=163)
transmembrane_regions (db=TMHMM db_id=tmhmm from=114 to=136)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=93)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
ACD49_1_29
ACD49, Gracilibacteria, Bacteria

Not on your lists

23970..24359
DNA (390bp) protein (130aa)
23970..24359 + (rbs_motif=TTA rbs_spacer=10bp)
hypothetical protein Tax=ACD49
ACD49_1_30

Not on your lists

24390..25994
DNA (1605bp) protein (535aa)
coiled-coil (db=Coil db_id=coil from=292 to=313 evalue=NA)
seg (db=Seg db_id=seg from=296 to=305)
Uncharacterized protein {ECO:0000313|EMBL:EKD66805.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Displaying items 1-30 of 62 in total

View Taxonomy