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ACD49_9

Alias: ACD49_5841.7465.22

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD49_9_1
ACD49, Gracilibacteria, Bacteria

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comp(3..1058)
DNA (1056bp) protein (352aa)
cheT; protein CheT
seg (db=Seg db_id=seg from=261 to=271)
transmembrane_regions (db=TMHMM db_id=tmhmm from=195 to=217)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
ACD49_9_2
ACD49, Gracilibacteria, Bacteria

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comp(1010..1555)
DNA (546bp) protein (182aa)
chemotaxis protein CheW
CheW (db=HMMPfam db_id=PF01584 from=28 to=157 evalue=8.8e-33 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165))
CheW-like (db=superfamily db_id=SSF50341 from=28 to=157 evalue=2.2e-27 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165))
no description (db=HMMSmart db_id=SM00260 from=11 to=156 evalue=5.2e-23 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165))
ACD49_9_3
unknown

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1787..2965
DNA (1179bp) protein (393aa)
Peptidase M23 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF68_9FIRM (db=UNIREF evalue=3.0e-08 bit_score=63.5 identity=27.74 coverage=36.3867684478371)
peptidase M23 (db=KEGG evalue=2.0e-07 bit_score=60.8 identity=25.31 coverage=37.1501272264631)
seg (db=Seg db_id=seg from=165 to=176)
Duplicated hybrid motif (db=superfamily db_id=SSF51261 from=92 to=359 evalue=1.9e-07 interpro_id=IPR011055 interpro_description=Duplicated hybrid motif)
ACD49_9_4
ACD49, Gracilibacteria, Bacteria

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comp(2962..3579)
DNA (618bp) protein (206aa)
seg (db=Seg db_id=seg from=68 to=80)
coiled-coil (db=Coil db_id=coil from=28 to=49 evalue=NA)
coiled-coil 28..49 Tax=ACD49
ACD49_9_5
ACD49, Gracilibacteria, Bacteria

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comp(3580..3804)
DNA (225bp) protein (75aa)
3580..3804 - (rbs_motif=TTTTAA rbs_spacer=4bp)
hypothetical protein Tax=ACD49
ACD49_9_6
ACD49, Gracilibacteria, Bacteria

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comp(3836..4177)
DNA (342bp) protein (114aa)
seg (db=Seg db_id=seg from=5 to=22)
seg 5..22 Tax=ACD49
ACD49_9_7
ACD49, Gracilibacteria, Bacteria

Not on your lists

4301..4672
DNA (372bp) protein (124aa)
4301..4672 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD49
ACD49_9_8
unknown

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4821..6197
DNA (1377bp) protein (459aa)
Peptidase U32 n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5QZC4_9FIRM (db=UNIREF evalue=5.0e-16 bit_score=89.7 identity=30.69 coverage=41.8300653594771)
peptidase U32 (EC:3.4.-.-)
coiled-coil (db=Coil db_id=coil from=276 to=297 evalue=NA)
seg (db=Seg db_id=seg from=284 to=296)
ACD49_9_9
ACD49, Gracilibacteria, Bacteria

Not on your lists

6395..7459
DNA (1065bp) protein (355aa)
coiled-coil (db=Coil db_id=coil from=198 to=219 evalue=NA)
seg (db=Seg db_id=seg from=156 to=167)
coiled-coil 198..219 Tax=ACD49
Displaying 9 items

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