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ACD49_10

Alias: ACD49_28565.45557.21

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD49_10_1
ACD49, Gracilibacteria, Bacteria

Not on your lists

335..616
DNA (282bp) protein (94aa)
seg (db=Seg db_id=seg from=3 to=19)
seg 3..19 Tax=ACD49
ACD49_10_2
ACD49, Gracilibacteria, Bacteria

Not on your lists

897..2354
DNA (1458bp) protein (486aa)
seg (db=Seg db_id=seg from=4 to=15)
seg (db=Seg db_id=seg from=303 to=320)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=119 to=133)
ACD49_10_3
ACD49, Gracilibacteria, Bacteria

Not on your lists

2357..2722
DNA (366bp) protein (122aa)
coiled-coil (db=Coil db_id=coil from=25 to=99 evalue=NA)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=17 evalue=6.0)
coiled-coil 25..99 Tax=ACD49
ACD49_10_4
ACD49, Gracilibacteria, Bacteria

Not on your lists

2744..2956
DNA (213bp) protein (71aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
hypothetical protein alias=ACD49_C00010G00004,ACD49_28565.45557.21G0004,ACD49_28565.45557.21_4 id=69329 tax=ACD49 species=Campylobacter curvus genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5
hypothetical protein Tax=ACD49
ACD49_10_5
unknown

Not on your lists

3017..3295
DNA (279bp) protein (93aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGD8_9EURY (db=UNIREF evalue=1.0e-10 bit_score=68.6 identity=41.18 coverage=82.7956989247312)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] (db=KEGG evalue=3.0e-10 bit_score=67.4 identity=35.29 coverage=89.247311827957)
DNA_binding_1 (db=HMMPfam db_id=PF01035 from=2 to=80 evalue=4.0e-15 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
Methylated DNA-protein cysteine methyltransferase, C-terminal domain (db=superfamily db_id=SSF46767 from=3 to=78 evalue=8.7e-14 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
ACD49_10_6
ACD49, Gracilibacteria, Bacteria

Not on your lists

3377..3688
DNA (312bp) protein (104aa)
3377..3688 + (rbs_motif=TTTAA rbs_spacer=11bp)
hypothetical protein Tax=ACD49
ACD49_10_7
ACD49, Gracilibacteria, Bacteria

Not on your lists

3783..5495
DNA (1713bp) protein (571aa)
ABC transporter
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
seg (db=Seg db_id=seg from=174 to=186)
seg (db=Seg db_id=seg from=93 to=106)
ACD49_10_8
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(5503..6183)
DNA (681bp) protein (227aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions 12..34 Tax=ACD49
ACD49_10_9
unknown

Not on your lists

6327..7445
DNA (1119bp) protein (373aa)
Tryptophanyl-tRNA synthetase n=2 Tax=Clostridium butyricum RepID=B1QZR4_CLOBU (db=UNIREF evalue=2.0e-64 bit_score=249.0 identity=41.67 coverage=87.6675603217158)
trpS; tryptophan--tRNA ligase (EC:6.1.1.2)
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=36 to=45 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=27 to=365 evalue=4.4e-66)
ACD49_10_10
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(7483..9369)
DNA (1887bp) protein (629aa)
microtubule-severing ATPase (EC:3.6.4.3); K13525 transitional endoplasmic reticulum ATPase (db=KEGG evalue=5.0e-28 bit_score=130.0 identity=27.25 coverage=52.9411764705882)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=338 to=613 evalue=2.9e-37)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=334 to=525 evalue=6.0e-26)
AAA (db=HMMPfam db_id=PF00004 from=390 to=526 evalue=1.4e-23 interpro_id=IPR003959 interpro_description=ATPase, AAA-type, core GO=Molecular Function: ATP binding (GO:0005524))
ACD49_10_11
ACD49, Gracilibacteria, Bacteria

Not on your lists

9503..10828
DNA (1326bp) protein (442aa)
coiled-coil (db=Coil db_id=coil from=392 to=420 evalue=NA)
seg (db=Seg db_id=seg from=392 to=413)
coiled-coil 392..420 Tax=ACD49
ACD49_10_12
ACD49, Gracilibacteria, Bacteria

Not on your lists

10898..12028
DNA (1131bp) protein (377aa)
asparagine--tRNA ligase
seg (db=Seg db_id=seg from=188 to=206)
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=112 to=376 evalue=7.6e-25)
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=112 to=370 evalue=7.3e-23)
ACD49_10_13
ACD49, Gracilibacteria, Bacteria

Not on your lists

12034..12801
DNA (768bp) protein (256aa)
seg (db=Seg db_id=seg from=17 to=32)
seg (db=Seg db_id=seg from=193 to=210)
seg (db=Seg db_id=seg from=39 to=60)
seg (db=Seg db_id=seg from=62 to=73)
ACD49_10_14
ACD49, Gracilibacteria, Bacteria

Not on your lists

12794..13969
DNA (1176bp) protein (392aa)
seg (db=Seg db_id=seg from=185 to=195)
seg (db=Seg db_id=seg from=233 to=246)
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=54 to=251 evalue=2.6e-06)
tRNA-synt_2c (db=HMMPfam db_id=PF01411 from=85 to=192 evalue=4.8e-06 interpro_id=IPR018164 interpro_description=Alanyl-tRNA synthetase, class IIc, N-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: alanine-tRNA ligase activity (GO:0004813), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: alanyl-tRNA aminoacylation (GO:0006419))
ACD49_10_15
ACD49, Gracilibacteria, Bacteria

Not on your lists

13998..14975
DNA (978bp) protein (326aa)
peptidase S66
seg (db=Seg db_id=seg from=114 to=133)
Peptidase_S66 (db=HMMPfam db_id=PF02016 from=13 to=306 evalue=1.7e-48 interpro_id=IPR003507 interpro_description=Peptidase S66, LD-carboxypeptidase A)
Class I glutamine amidotransferase-like (db=superfamily db_id=SSF52317 from=1 to=169 evalue=6.3e-33)
ACD49_10_16
ACD49, Gracilibacteria, Bacteria

Not on your lists

14977..15579
DNA (603bp) protein (201aa)
HAD family hydrolase
seg (db=Seg db_id=seg from=60 to=74)
seg (db=Seg db_id=seg from=188 to=200)
HAD-like (db=superfamily db_id=SSF56784 from=1 to=194 evalue=8.6e-18)
ACD49_10_17
ACD49, ACD49, ACD49, ACD49, Gracilibacteria, Bacteria

Not on your lists

15611..15718
DNA (108bp) protein (36aa)
seg (db=Seg db_id=seg from=7 to=15)
ACD49_10_18
ACD49, Gracilibacteria, Bacteria

Not on your lists

15657..17261
DNA (1605bp) protein (535aa)
seg (db=Seg db_id=seg from=520 to=531)
seg (db=Seg db_id=seg from=359 to=377)
seg (db=Seg db_id=seg from=328 to=339)
seg (db=Seg db_id=seg from=83 to=111)
ACD49_10_19
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(17331..17729)
DNA (399bp) protein (133aa)
17331..17729 - (rbs_motif=TTTAA rbs_spacer=5bp)
hypothetical protein Tax=ACD49
ACD49_10_20
unknown

Not on your lists

comp(17807..18496)
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYT2_9CLOT (db=UNIREF evalue=3.0e-11 bit_score=72.0 identity=36.47 coverage=36.0869565217391)
DNA polymerase III, delta prime subunit (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] (db=KEGG evalue=9.0e-10 bit_score=67.0 identity=30.08 coverage=54.3478260869565)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=46 to=188 evalue=1.0e-17)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=41 to=137 evalue=3.9e-14)
ACD49_10_21
ACD49, Gracilibacteria, Bacteria

Not on your lists

18590..19606
DNA (1017bp) protein (339aa)
seg (db=Seg db_id=seg from=13 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg 13..26 Tax=ACD49
ACD49_10_22
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(19683..20186)
DNA (504bp) protein (168aa)
yjeE; hypothetical protein
seg (db=Seg db_id=seg from=14 to=48)
UPF0079 (db=HMMPfam db_id=PF02367 from=40 to=142 evalue=1.9e-17 interpro_id=IPR003442 interpro_description=Uncharacterised protein family UPF0079, ATPase bacteria)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=18 to=166 evalue=4.1e-17)
ACD49_10_23
ACD49, Gracilibacteria, Bacteria

Not on your lists

20193..20756
DNA (564bp) protein (188aa)
coiled-coil (db=Coil db_id=coil from=56 to=77 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
coiled-coil 56..77 Tax=ACD49
ACD49_10_24
ACD49, Gracilibacteria, Bacteria

Not on your lists

20778..21329
DNA (552bp) protein (184aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=132 to=147)
seg (db=Seg db_id=seg from=19 to=31)
seg 19..31 Tax=ACD49
ACD49_10_25
ACD49, Gracilibacteria, Bacteria

Not on your lists

21338..22429
DNA (1092bp) protein (364aa)
type 4 fimbrial assembly protein (PilC)
seg (db=Seg db_id=seg from=129 to=144)
transmembrane_regions (db=TMHMM db_id=tmhmm from=334 to=356)
transmembrane_regions (db=TMHMM db_id=tmhmm from=174 to=193)
ACD49_10_26
ACD49, Gracilibacteria, Bacteria

Not on your lists

22585..26061
DNA (3477bp) protein (1159aa)
seg (db=Seg db_id=seg from=497 to=514)
transmembrane_regions (db=TMHMM db_id=tmhmm from=1090 to=1112)
seg 497..514 Tax=ACD49
ACD49_10_27
ACD49, Gracilibacteria, Bacteria

Not on your lists

26180..27874
DNA (1695bp) protein (565aa)
seg (db=Seg db_id=seg from=336 to=349)
seg (db=Seg db_id=seg from=232 to=250)
seg (db=Seg db_id=seg from=176 to=188)
seg (db=Seg db_id=seg from=89 to=99)
ACD49_10_28
ACD49, Gracilibacteria, Bacteria

Not on your lists

27891..29957
DNA (2067bp) protein (689aa)
seg (db=Seg db_id=seg from=638 to=654)
seg (db=Seg db_id=seg from=25 to=40)
seg 25..40 Tax=ACD49
ACD49_10_29

Not on your lists


30089..31993
DNA (1905bp) protein (635aa)
DNA gyrase subunit B n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDG8_THET1 (db=UNIREF evalue=0.0 bit_score=740.0 identity=58.52 coverage=99.2125984251969)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
seg (db=Seg db_id=seg from=376 to=390)
ACD49_10_30
ACD49, Gracilibacteria, Bacteria

Not on your lists

32060..32752
DNA (693bp) protein (231aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=54)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
seg (db=Seg db_id=seg from=43 to=54)
seg (db=Seg db_id=seg from=8 to=32)
Displaying items 1-30 of 39 in total

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