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ACD49_17

Alias: ACD49_16875.20874.21

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD49_17_1
ACD49, Gracilibacteria, Bacteria

Not on your lists

3..902
DNA (900bp) protein (300aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=272 to=294)
transmembrane_regions (db=TMHMM db_id=tmhmm from=218 to=240)
transmembrane_regions (db=TMHMM db_id=tmhmm from=129 to=151)
transmembrane_regions (db=TMHMM db_id=tmhmm from=97 to=119)
ACD49_17_2
ACD49, Gracilibacteria, Bacteria

Not on your lists

1059..2498
DNA (1440bp) protein (480aa)
hypothetical protein
hypothetical protein
Pyruvate kinase n=4 Tax=Leptospira RepID=Q04N91_LEPBJ (db=UNIREF evalue=4.0e-89 bit_score=332.0 identity=37.76 coverage=97.9166666666667)
PYRUVATE KINASE (db=HMMPanther db_id=PTHR11817 from=5 to=477 evalue=1.5e-135 interpro_id=IPR001697 interpro_description=Pyruvate kinase GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: pyruvate kinase activity (GO:0004743), Biological Process: glycolysis (GO:0006096), Molecular Function: potassium ion binding (GO:0030955))
ACD49_17_3
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(2602..2970)
DNA (369bp) protein (123aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions 5..27 Tax=ACD49
ACD49_17_4
ACD49, Gracilibacteria, Bacteria

Not on your lists

3101..3946
DNA (846bp) protein (282aa)
coiled-coil (db=Coil db_id=coil from=163 to=184 evalue=NA)
seg (db=Seg db_id=seg from=2 to=12)
seg (db=Seg db_id=seg from=268 to=281)
coiled-coil 163..184 Tax=ACD49
ACD49_17_5
ACD49, Gracilibacteria, Bacteria

Not on your lists

4151..6496
DNA (2346bp) protein (782aa)
Penicillin-binding protein, transpeptidase protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
seg (db=Seg db_id=seg from=253 to=271)
seg (db=Seg db_id=seg from=2 to=15)
ACD49_17_6
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(6493..7047)
DNA (555bp) protein (185aa)
O-methyltransferase
O-methyltransferase family 3 n=1 Tax=Thermincola sp. JR RepID=D5X824_9FIRM (db=UNIREF evalue=8.0e-16 bit_score=86.7 identity=40.37 coverage=57.8378378378378)
seg (db=Seg db_id=seg from=134 to=152)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=7 to=167 evalue=3.4e-26)
ACD49_17_7
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(7058..8320)
DNA (1263bp) protein (421aa)
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
seg (db=Seg db_id=seg from=174 to=190)
coiled-coil (db=Coil db_id=coil from=400 to=421 evalue=NA)
UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE (db=HMMPanther db_id=PTHR23135:SF2 from=81 to=419 evalue=1.6e-57)
ACD49_17_8
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(8579..9076)
DNA (498bp) protein (166aa)
seg (db=Seg db_id=seg from=68 to=75)
seg 68..75 Tax=ACD49
ACD49_17_9
ACD49, Gracilibacteria, Bacteria

Not on your lists

9250..10704
DNA (1455bp) protein (485aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=9 Tax=Thermoanaerobacteraceae RepID=GATA_THEP3 (db=UNIREF evalue=2.0e-122 bit_score=443.0 identity=48.07 coverage=99.1752577319588)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4)
seg (db=Seg db_id=seg from=139 to=158)
ACD49_17_10

Not on your lists

10876..11163
DNA (288bp) protein (96aa)
endonuclease
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=2 to=90 evalue=3.7e-14 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG (db=HMMPfam db_id=PF01541 from=4 to=77 evalue=1.2e-06 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
endonuclease; K07461 putative endonuclease alias=ACD49_16875.20874.21G0010,ACD49_16875.20874.21_10,ACD49_C00017G00010 id=69562 tax=ACD49 species=Rickettsia bellii genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5
ACD49_17_11

Not on your lists

11299..12066
DNA (768bp) protein (256aa)
Exodeoxyribonuclease III Xth n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I5T7_9CLOT (db=UNIREF evalue=4.0e-86 bit_score=321.0 identity=62.35 coverage=97.65625)
hypothetical protein
hypothetical protein
AP_NUCLEASE_F1_3 (db=PatternScan db_id=PS00728 from=214 to=225 evalue=0.0 interpro_id=IPR020848 interpro_description=AP endonuclease, family 1, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: endonuclease activity (GO:0004519), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
ACD49_17_12
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(12068..14770)
DNA (2703bp) protein (901aa)
ATP-dependent chaperone ClpB n=4 Tax=Ruminococcus RepID=D4M3E6_9FIRM (db=UNIREF evalue=0.0 bit_score=847.0 identity=47.71 coverage=94.5615982241953)
protein disaggregation chaperone
protein disaggregation chaperone
coiled-coil (db=Coil db_id=coil from=462 to=483 evalue=NA)
ACD49_17_13
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(14897..15103)
DNA (207bp) protein (69aa)
coiled-coil (db=Coil db_id=coil from=5 to=26 evalue=NA)
coiled-coil 5..26 Tax=ACD49
ACD49_17_14
ACD49, Gracilibacteria, Bacteria

Not on your lists

15588..16658
DNA (1071bp) protein (357aa)
peptide chain release factor 1
peptide chain release factor 1
Peptide chain release factor 1 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCP5_THET1 (db=UNIREF evalue=5.0e-90 bit_score=335.0 identity=48.56 coverage=96.9187675070028)
coiled-coil (db=Coil db_id=coil from=41 to=72 evalue=NA)
ACD49_17_15
unknown

Not on your lists

comp(16663..17772)
DNA (1110bp) protein (370aa)
type II secretion system protein F
Type II secretion system protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GPY7_9DELT (db=UNIREF evalue=1.0e-30 bit_score=137.0 identity=29.16 coverage=92.1621621621622)
transmembrane_regions (db=TMHMM db_id=tmhmm from=342 to=364)
transmembrane_regions (db=TMHMM db_id=tmhmm from=164 to=182)
ACD49_17_16

Not on your lists

17878..18309
DNA (432bp) protein (144aa)
heat-shock protein Hsp20
Small heat shock protein n=3 Tax=candidate division TM7 RepID=UPI00016B2686 (db=UNIREF evalue=6.0e-12 bit_score=73.2 identity=38.24 coverage=69.4444444444444)
seg (db=Seg db_id=seg from=19 to=33)
HSP20-like chaperones (db=superfamily db_id=SSF49764 from=33 to=140 evalue=5.1e-23 interpro_id=IPR008978 interpro_description=HSP20-like chaperone)
ACD49_17_17
ACD49, Gracilibacteria, Bacteria

Not on your lists

18309..18590
DNA (282bp) protein (94aa)
seg (db=Seg db_id=seg from=43 to=57)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg 43..57 Tax=ACD49
ACD49_17_18
ACD49, Gracilibacteria, Bacteria

Not on your lists

18578..19327
DNA (750bp) protein (250aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
seg (db=Seg db_id=seg from=158 to=169)
seg (db=Seg db_id=seg from=4 to=20)
seg 4..20 Tax=ACD49
ACD49_17_19
ACD49, Gracilibacteria, Bacteria

Not on your lists

19844..20233
DNA (390bp) protein (130aa)
Dimethyladenosine transferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=129 evalue=4.3e-16)
RrnaAD (db=HMMPfam db_id=PF00398 from=1 to=128 evalue=3.6e-12 interpro_id=IPR001737 interpro_description=Ribosomal RNA adenine methylase transferase GO=Biological Process: rRNA modification (GO:0000154), Molecular Function: rRNA (adenine-N6,N6-)-dimethyltransferase activity (GO:0000179), Molecular Function: rRNA methyltransferase activity (GO:0008649))
DIMETHYLADENOSINE TRANSFERASE (db=HMMPanther db_id=PTHR11727 from=1 to=128 evalue=1.0e-09 interpro_id=IPR001737 interpro_description=Ribosomal RNA adenine methylase transferase GO=Biological Process: rRNA modification (GO:0000154), Molecular Function: rRNA (adenine-N6,N6-)-dimethyltransferase activity (GO:0000179), Molecular Function: rRNA methyltransferase activity (GO:0008649))
Displaying 19 items

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