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ACD49_24

Alias: ACD49_12947.15072.23

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD49_24_1
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(1..117)
DNA (117bp) protein (39aa)
1..117 - (rbs_motif=TTTTA rbs_spacer=11bp)
hypothetical protein Tax=ACD49
ACD49_24_2
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(105..692)
DNA (588bp) protein (196aa)
seg (db=Seg db_id=seg from=149 to=157)
seg 149..157 Tax=ACD49
ACD49_24_3
ACD49, Gracilibacteria, Bacteria

Not on your lists


comp(699..3278)
DNA (2580bp) protein (860aa)
DNA gyrase, A subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYU8_THERP (db=UNIREF evalue=0.0 bit_score=774.0 identity=48.69 coverage=91.9767441860465)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
seg (db=Seg db_id=seg from=371 to=383)
ACD49_24_4
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(3393..4238)
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GAB0_GEOUR (db=UNIREF evalue=8.0e-95 bit_score=350.0 identity=63.81 coverage=93.6170212765958)
hypothetical protein
hypothetical protein
seg (db=Seg db_id=seg from=272 to=281)
ACD49_24_5
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(4326..5066)
DNA (741bp) protein (247aa)
coiled-coil (db=Coil db_id=coil from=118 to=160 evalue=NA)
seg (db=Seg db_id=seg from=105 to=116)
seg (db=Seg db_id=seg from=124 to=157)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
ACD49_24_6
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(5186..5998)
DNA (813bp) protein (271aa)
seg (db=Seg db_id=seg from=100 to=108)
seg (db=Seg db_id=seg from=123 to=137)
seg 100..108 Tax=ACD49
ACD49_24_7
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(6085..6675)
DNA (591bp) protein (197aa)
6085..6675 - (rbs_motif=TTTAA rbs_spacer=10bp)
hypothetical protein Tax=ACD49
ACD49_24_8
ACD49, Gracilibacteria, Bacteria

Not on your lists

6767..7285
DNA (519bp) protein (173aa)
Rubredoxin-type Fe4 protein
RUBREDOXIN (db=PatternScan db_id=PS00202 from=49 to=59 evalue=0.0 interpro_id=IPR018527 interpro_description=Rubredoxin, iron-binding site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: metal ion binding (GO:0046872))
Rubredoxin (db=HMMPfam db_id=PF00301 from=19 to=65 evalue=1.4e-14 interpro_id=IPR004039 interpro_description=Rubredoxin-type Fe(Cys)4 protein GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: metal ion binding (GO:0046872))
Rubredoxin-like (db=superfamily db_id=SSF57802 from=17 to=69 evalue=3.1e-14)
ACD49_24_9
unknown

Not on your lists

7419..8267
DNA (849bp) protein (283aa)
GTP-binding protein Era
GTP-binding protein era homolog n=1 Tax=Spiroplasma citri RepID=Q14P63_SPICI (db=UNIREF evalue=1.0e-43 bit_score=180.0 identity=38.32 coverage=91.5194346289753)
seg (db=Seg db_id=seg from=105 to=114)
seg (db=Seg db_id=seg from=269 to=282)
ACD49_24_10

Not on your lists

8274..8924
DNA (651bp) protein (217aa)
methyltransferase type 11
Putative uncharacterized protein n=1 Tax=uncultured Chloroflexi bacterium RepID=Q2Z013_9CHLR (db=UNIREF evalue=7.0e-12 bit_score=73.9 identity=25.58 coverage=89.4009216589862)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=6 to=207 evalue=3.8e-28)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=6 to=199 evalue=1.1e-15)
ACD49_24_11
ACD49, Gracilibacteria, Bacteria

Not on your lists

8983..9195
DNA (213bp) protein (71aa)
8983..9195 + (rbs_motif=TTTTA rbs_spacer=11bp)
hypothetical protein Tax=ACD49
ACD49_24_12
ACD49, Gracilibacteria, Bacteria

Not on your lists

9253..9555
DNA (303bp) protein (101aa)
9253..9555 + (rbs_motif=TTTAA rbs_spacer=10bp)
hypothetical protein Tax=ACD49
ACD49_24_13
ACD49, Gracilibacteria, Bacteria

Not on your lists

9685..10374
DNA (690bp) protein (230aa)
seg (db=Seg db_id=seg from=120 to=133)
cAMP-binding domain-like (db=superfamily db_id=SSF51206 from=54 to=201 evalue=2.2e-11 interpro_id=IPR018490 interpro_description=Cyclic nucleotide-binding-like)
cNMP_binding (db=HMMPfam db_id=PF00027 from=94 to=175 evalue=5.6e-06 interpro_id=IPR000595 interpro_description=Cyclic nucleotide-binding)
CNMP_BINDING_3 (db=ProfileScan db_id=PS50042 from=104 to=165 evalue=9.691 interpro_id=IPR000595 interpro_description=Cyclic nucleotide-binding)
ACD49_24_14
ACD49, Gracilibacteria, Bacteria

Not on your lists

10441..11034
DNA (594bp) protein (198aa)
guanylate cyclase
HD (db=HMMPfam db_id=PF01966 from=29 to=124 evalue=0.00016 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
metal-dependent phosphohydrolase alias=ACD49_C00024G00014,ACD49_12947.15072.23G0014,ACD49_12947.15072.23_14 id=69689 tax=ACD49 species=Zunongwangia profunda genus=Zunongwangia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes organism_group=BD1-5 organism_desc=BD1-5
metal-dependent phosphohydrolase Tax=ACD49
ACD49_24_15
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(11031..12332)
DNA (1302bp) protein (434aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase
seg (db=Seg db_id=seg from=36 to=50)
UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE (db=HMMPanther db_id=PTHR23135:SF4 from=40 to=427 evalue=1.1e-102)
MUR LIGASE FAMILY MEMBER (db=HMMPanther db_id=PTHR23135 from=40 to=427 evalue=1.1e-102)
ACD49_24_16

Not on your lists

12366..12914
DNA (549bp) protein (183aa)
peptide deformylase (EC:3.5.1.88)
Pep_deformylase (db=HMMPfam db_id=PF01327 from=25 to=173 evalue=6.3e-35 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
Peptide deformylase (db=superfamily db_id=SSF56420 from=16 to=180 evalue=4.5e-32 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
POLYPEPTIDE DEFORMYLASE (db=HMMPanther db_id=PTHR10458 from=22 to=176 evalue=6.9e-28 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
ACD49_24_17
ACD49, Gracilibacteria, Bacteria

Not on your lists

12925..13707
DNA (783bp) protein (261aa)
seg (db=Seg db_id=seg from=5 to=22)
seg 5..22 Tax=ACD49
ACD49_24_18
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(13916..14062)
DNA (147bp) protein (49aa)
13916..14062 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD49
ACD49_24_19
unknown

Not on your lists

14130..14609
DNA (480bp) protein (160aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Filifactor alocis ATCC 35896 RepID=D6GTP9_9FIRM (db=UNIREF evalue=6.0e-27 bit_score=122.0 identity=45.99 coverage=85.0)
seg (db=Seg db_id=seg from=140 to=149)
RuvC (db=HMMPfam db_id=PF02075 from=4 to=149 evalue=9.4e-40 interpro_id=IPR002176 interpro_description=Crossover junction endodeoxyribonuclease RuvC GO=Molecular Function: endodeoxyribonuclease activity (GO:0004520), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
ACD49_24_20
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(14788..15111)
DNA (324bp) protein (108aa)
seg (db=Seg db_id=seg from=3 to=18)
seg (db=Seg db_id=seg from=37 to=47)
seg 3..18 Tax=ACD49
Displaying 20 items

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