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ACD50_19

Alias: ACD50_194222.10383.8

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_19_1
unknown

Not on your lists

comp(2..61)
DNA (60bp) protein (20aa)
2..61 - (rbs_motif=ATA rbs_spacer=7bp)
ACD50_19_2
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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491..844
DNA (354bp) protein (118aa)
SAF domain protein
SAF domain protein n=3 Tax=Chloroflexus RepID=B8GCI5_CHLAD (db=UNIREF evalue=8.0e-11 bit_score=69.3 identity=39.56 coverage=74.5762711864407)
SAF domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_19_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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841..2112
DNA (1272bp) protein (424aa)
hypothetical protein
Alpha-L-rhamnosidase domain protein n=1 Tax=bacterium Ellin514 RepID=B9XFK0_9BACT (db=UNIREF evalue=6.0e-53 bit_score=212.0 identity=33.52 coverage=78.3018867924528)
coiled-coil (db=Coil db_id=coil from=157 to=178 evalue=NA)
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=13 to=362 evalue=1.4e-06 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core)
ACD50_19_4
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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2109..3101
DNA (993bp) protein (331aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=66 to=306 evalue=5.5e-15 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core)
transmembrane_regions 5..22 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_19_5
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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3178..3744
DNA (567bp) protein (189aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=162 to=184)
transmembrane_regions 162..184 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_19_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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3756..4697
DNA (942bp) protein (314aa)
cytochrome c oxidase subunit II
transmembrane_regions (db=TMHMM db_id=tmhmm from=160 to=182)
transmembrane_regions (db=TMHMM db_id=tmhmm from=128 to=147)
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=113)
ACD50_19_7

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comp(4746..5006)
DNA (261bp) protein (87aa)
seg (db=Seg db_id=seg from=13 to=27)
Uncharacterized protein {ECO:0000313|EMBL:EKD65419.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD50_19_8
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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6104..7144
DNA (1041bp) protein (347aa)
copA; copper-exporting P-type ATPase A (EC:3.6.3.-)
transmembrane_regions (db=TMHMM db_id=tmhmm from=318 to=340)
transmembrane_regions (db=TMHMM db_id=tmhmm from=284 to=306)
transmembrane_regions (db=TMHMM db_id=tmhmm from=252 to=274)
ACD50_19_9
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

7173..7730
DNA (558bp) protein (186aa)
7173..7730 + (rbs_motif=ATAAT rbs_spacer=8bp)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_19_10
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

7754..8203
DNA (450bp) protein (150aa)
hypothetical protein
seg (db=Seg db_id=seg from=14 to=25)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=42 to=63 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=1 to=141 evalue=8.4e-22 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
ACD50_19_11
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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8245..8700
DNA (456bp) protein (152aa)
8245..8700 + (rbs_motif=ATA rbs_spacer=8bp)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
hypothetical protein
ACD50_19_12
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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8761..8988
DNA (228bp) protein (76aa)
copA; putative copper-exporting P-type ATPase A
HMA_1 (db=PatternScan db_id=PS01047 from=11 to=40 evalue=0.0 interpro_id=IPR017969 interpro_description=Heavy-metal-associated, conserved site GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA, heavy metal-associated domain (db=superfamily db_id=SSF55008 from=3 to=75 evalue=1.6e-17 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA (db=HMMPfam db_id=PF00403 from=10 to=69 evalue=3.7e-17 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
ACD50_19_13
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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8992..9255
DNA (264bp) protein (88aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
transmembrane_regions 28..50 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_19_14

Not on your lists

9272..10417
DNA (1146bp) protein (382aa)
disulfide bond oxidoreductase D family protein
Putative cytochrome C biogenesis protein transmembrane region n=2 Tax=environmental samples RepID=B3TBF8_9ARCH (db=UNIREF evalue=2.0e-31 bit_score=140.0 identity=38.8 coverage=78.0104712041885)
transmembrane_regions (db=TMHMM db_id=tmhmm from=363 to=381)
transmembrane_regions (db=TMHMM db_id=tmhmm from=321 to=343)
Displaying 14 items

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