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ACD50_29

Alias: ACD50_125932.3082.9

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_29_1

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comp(21..269)
DNA (249bp) protein (83aa)
seg (db=Seg db_id=seg from=36 to=45)
seg (db=Seg db_id=seg from=59 to=78)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=46)
ACD50_29_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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543..1808
DNA (1266bp) protein (422aa)
Trans_reg_C (db=HMMPfam db_id=PF00486 from=345 to=420 evalue=6.1e-15 interpro_id=IPR001867 interpro_description=Signal transduction response regulator, C-terminal GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=323 to=420 evalue=8.4e-15 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process:
no description (db=HMMSmart db_id=SM00862 from=343 to=420 evalue=2.9e-11 interpro_id=IPR001867 interpro_description=Signal transduction response regulator, C-terminal GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=317 to=420 evalue=7.7e-11 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ACD50_29_3

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1810..3114
DNA (1305bp) protein (435aa)
coiled-coil (db=Coil db_id=coil from=316 to=337 evalue=NA)
seg (db=Seg db_id=seg from=426 to=435)
Uncharacterized protein {ECO:0000313|EMBL:EKD65612.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 3 items

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