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ACD50_42

Alias: ACD50_113542.9973.8

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_42_1
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(3..734)
DNA (732bp) protein (244aa)
iron ABC transporter ATP-binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=213 to=235)
transmembrane_regions (db=TMHMM db_id=tmhmm from=119 to=141)
ACD50_42_2
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

1020..1226
DNA (207bp) protein (69aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=58)
seg (db=Seg db_id=seg from=15 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=6 to=28)
DUF378 (db=HMMPfam db_id=PF04070 from=2 to=56 evalue=1.1e-15 interpro_id=IPR007211 interpro_description=Protein of unknown function DUF378)
ACD50_42_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(1290..1823)
DNA (534bp) protein (178aa)
exported protein of unknown function
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
hypothetical protein alias=ACD50_C00042G00003,ACD50_113542.9973.8G0003,ACD50_113542.9973.8_3 id=71712 tax=ACD50 species=Nitrosopumilus maritimus genus=Nitrosopumilus taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota organism_group=OP11 organism_desc=OP11
ACD50_42_4

Not on your lists

comp(1838..3001)
DNA (1164bp) protein (388aa)
quinoprotein glucose dehydrogenase
quinoprotein glucose dehydrogenase
Glucose sorbosone dehydrogenase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R200_9DELT (db=UNIREF evalue=8.0e-92 bit_score=340.0 identity=55.32 coverage=82.9896907216495)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACD50_42_5
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

3069..3512
DNA (444bp) protein (148aa)
thioredoxin
Putative uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AGX1_9ACTN (db=UNIREF evalue=1.0e-11 bit_score=72.0 identity=39.76 coverage=52.7027027027027)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=44 to=145 evalue=3.1e-21 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
ACD50_42_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

3550..4443
DNA (894bp) protein (298aa)
hypothetical protein
seg (db=Seg db_id=seg from=157 to=171)
seg (db=Seg db_id=seg from=132 to=149)
seg (db=Seg db_id=seg from=30 to=43)
ACD50_42_7
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

4517..5110
DNA (594bp) protein (198aa)
4517..5110 + (rbs_motif=TAA rbs_spacer=3bp)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_42_8
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

5127..6515
DNA (1389bp) protein (463aa)
purD; phosphoribosylamine--glycine ligase
seg (db=Seg db_id=seg from=82 to=97)
GARS (db=PatternScan db_id=PS00184 from=311 to=318 evalue=0.0 interpro_id=IPR020559 interpro_description=Phosphoribosylglycinamide synthetase, conserved site GO=Molecular Function: phosphoribosylamine-glycine ligase activity (GO:0004637), Biological Process: purine base biosynthetic process (GO:0009113))
PHOSPHORIBOSYLAMINE-GLYCINE LIGASE-RELATED (db=HMMPanther db_id=PTHR10520 from=119 to=462 evalue=4.2e-46)
ACD50_42_9
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

6541..7377
DNA (837bp) protein (279aa)
protease htpX
transmembrane_regions (db=TMHMM db_id=tmhmm from=173 to=195)
transmembrane_regions (db=TMHMM db_id=tmhmm from=141 to=163)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=49)
ACD50_42_10

Not on your lists

7388..8434
DNA (1047bp) protein (349aa)
hypothetical protein
hypothetical protein
Dipeptidylaminopeptidase/acylaminoacyl-peptidase n=1 Tax=Meiothermus ruber DSM 1279 RepID=D3PLW0_MEIRD (db=UNIREF evalue=1.0e-103 bit_score=380.0 identity=58.25 coverage=86.2464183381089)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
ACD50_42_11

Not on your lists

8483..8983
DNA (501bp) protein (167aa)
seg (db=Seg db_id=seg from=46 to=68)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=157 evalue=8.0e-24 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=1 to=142 evalue=3.5e-15 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=63 to=135 evalue=2.2e-11 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
ACD50_42_12

Not on your lists

9106..9561
DNA (456bp) protein (152aa)
9106..9561 + (rbs_motif=TATTA rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD65675.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD50_42_13

Not on your lists

9776..9916
DNA (141bp) protein (47aa)
seg (db=Seg db_id=seg from=5 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Uncharacterized protein {ECO:0000313|EMBL:EKD65676.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD50_42_14

Not on your lists

9904..10005
DNA (102bp) protein (34aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKD65677.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 14 items

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