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ACD50_48

Alias: ACD50_24675.8136.8

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_48_1
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

2..448
DNA (447bp) protein (149aa)
Nudix (db=superfamily db_id=SSF55811 from=7 to=117 evalue=4.9e-06 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix 7..117 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_48_2
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(454..741)
DNA (288bp) protein (96aa)
rbp; RNA-binding protein
RNA-BINDING PROTEIN (db=HMMPanther db_id=PTHR10432 from=3 to=85 evalue=5.2e-31)
GLYCINE-RICH RNA-BINDING PROTEIN (db=HMMPanther db_id=PTHR10432:SF31 from=3 to=85 evalue=5.2e-31 interpro_id=IPR015465 interpro_description=RNA recognition motif, glycine rich protein)
RNA-binding domain, RBD (db=superfamily db_id=SSF54928 from=2 to=95 evalue=3.1e-29)
ACD50_48_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(943..1668)
DNA (726bp) protein (242aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XG45_9FLAO (db=UNIREF evalue=3.0e-42 bit_score=175.0 identity=41.99 coverage=95.0413223140496)
transmembrane_regions (db=TMHMM db_id=tmhmm from=188 to=206)
transmembrane_regions (db=TMHMM db_id=tmhmm from=221 to=240)
ACD50_48_4
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(2024..2650)
DNA (627bp) protein (209aa)
seg (db=Seg db_id=seg from=39 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=104 to=126)
transmembrane_regions (db=TMHMM db_id=tmhmm from=138 to=160)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
ACD50_48_5
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

2704..2991
DNA (288bp) protein (96aa)
2704..2991 + (rbs_motif=ATA rbs_spacer=8bp)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_48_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(3028..4029)
DNA (1002bp) protein (334aa)
hypothetical protein
seg (db=Seg db_id=seg from=175 to=190)
transmembrane_regions (db=TMHMM db_id=tmhmm from=300 to=322)
transmembrane_regions (db=TMHMM db_id=tmhmm from=277 to=296)
ACD50_48_7
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(4022..4510)
DNA (489bp) protein (163aa)
seg (db=Seg db_id=seg from=38 to=56)
seg (db=Seg db_id=seg from=7 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions 7..29 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_48_8
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(4596..5318)
DNA (723bp) protein (241aa)
Methyltransferase domain protein n=7 Tax=Bacteroides RepID=D4VRX1_9BACE (db=UNIREF evalue=7.0e-12 bit_score=74.3 identity=25.74 coverage=92.5311203319502)
putative methyltransferase (EC:2.1.1.-)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=229 evalue=4.2e-27)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=49 to=146 evalue=9.5e-15)
ACD50_48_9
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(5408..6421)
DNA (1014bp) protein (338aa)
seg (db=Seg db_id=seg from=160 to=174)
seg (db=Seg db_id=seg from=36 to=56)
TAT_signal_seq: Tat (twin-arginine tra (db=HMMTigr db_id=TIGR01409 from=27 to=49 evalue=0.055 interpro_id=IPR006311 interpro_description=Twin-arginine translocation pathway, signal sequence)
TAT (db=ProfileScan db_id=PS51318 from=1 to=57 evalue=7.895 interpro_id=IPR006311 interpro_description=Twin-arginine translocation pathway, signal sequence)
ACD50_48_10
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(6526..6879)
DNA (354bp) protein (118aa)
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=109 evalue=5.6e-12)
no description (db=Gene3D db_id=G3DSA:3.10.180.10 from=10 to=111 evalue=0.0006)
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_48_11
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(6953..7609)
DNA (657bp) protein (219aa)
peptidase S51 dipeptidase E
Peptidase_S51 (db=HMMPfam db_id=PF03575 from=49 to=204 evalue=1.0e-25 interpro_id=IPR005320 interpro_description=Peptidase S51, dipeptidase E GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type peptidase activity (GO:0008236))
no description (db=Gene3D db_id=G3DSA:3.40.50.880 from=1 to=218 evalue=2.0e-22)
Class I glutamine amidotransferase-like (db=superfamily db_id=SSF52317 from=2 to=217 evalue=1.3e-18)
ACD50_48_12
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

7688..7786
DNA (99bp) protein (33aa)
7688..7786 + (rbs_motif=TACTA rbs_spacer=5bp)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_48_13
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

7803..8045
DNA (243bp) protein (81aa)
seg (db=Seg db_id=seg from=63 to=76)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=52)
transmembrane_regions (db=TMHMM db_id=tmhmm from=57 to=76)
seg (db=Seg db_id=seg from=27 to=53)
ACD50_48_14
unknown

Not on your lists

8106..8168
DNA (63bp) protein (21aa)
8106..8168 + (rbs_motif=TAA rbs_spacer=9bp)
Displaying 14 items

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