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ACD50_49

Alias: ACD50_468516.12066.8

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_49_1
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

3..680
DNA (678bp) protein (226aa)
molecular chaperone DnaJ
seg (db=Seg db_id=seg from=51 to=66)
seg (db=Seg db_id=seg from=17 to=36)
seg (db=Seg db_id=seg from=1 to=14)
ACD50_49_2
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

683..1048
DNA (366bp) protein (122aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=100 to=117)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions 7..29 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_49_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(1052..1201)
DNA (150bp) protein (50aa)
seg (db=Seg db_id=seg from=1 to=16)
seg 1..16 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_49_4

Not on your lists

comp(1373..1936)
DNA (564bp) protein (188aa)
hypothetical protein
Thioredoxin-like (db=superfamily db_id=SSF52833 from=4 to=187 evalue=2.0e-51 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
AhpC-TSA (db=HMMPfam db_id=PF00578 from=12 to=136 evalue=3.6e-25 interpro_id=IPR000866 interpro_description=Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen GO=Molecular Function: antioxidant activity (GO:0016209), Molecular Function: oxidoreductase activity (GO:0016491))
no description (db=Gene3D db_id=G3DSA:3.40.30.10 from=10 to=137 evalue=1.4e-21 interpro_id=IPR012335 interpro_description=Thioredoxin fold)
ACD50_49_5
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

2024..2818
DNA (795bp) protein (265aa)
TatD family hydrolase
TIGR00010: hydrolase, TatD family (db=HMMTigr db_id=TIGR00010 from=1 to=264 evalue=7.2e-93 interpro_id=IPR015991 interpro_description=Deoxyribonuclease, TatD Mg-dependent, prokaryote)
Mg-dependent DNase, TatD type (db=HMMPIR db_id=PIRSF005902 from=1 to=264 evalue=2.8e-87 interpro_id=IPR012278 interpro_description=Deoxyribonuclease, TatD Mg-dependent)
Metallo-dependent hydrolases (db=superfamily db_id=SSF51556 from=1 to=264 evalue=2.6e-79)
ACD50_49_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

2815..4308
DNA (1494bp) protein (498aa)
Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FDY3_9CHLO (db=UNIREF evalue=7.0e-48 bit_score=195.0 identity=27.7 coverage=85.3413654618474)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=418 to=440)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
ACD50_49_7
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

4305..5756
DNA (1452bp) protein (484aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=157 to=174)
transmembrane_regions (db=TMHMM db_id=tmhmm from=207 to=229)
transmembrane_regions (db=TMHMM db_id=tmhmm from=252 to=274)
ACD50_49_8
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

5740..6093
DNA (354bp) protein (118aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=115)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=62 to=83)
ACD50_49_9
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

6093..7187
DNA (1095bp) protein (365aa)
UDP-phosphate alpha-N-acetylglucosaminyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=334 to=356)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=68)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=90)
ACD50_49_10

Not on your lists

7168..8109
DNA (942bp) protein (314aa)
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=293 to=312)
transmembrane_regions (db=TMHMM db_id=tmhmm from=208 to=230)
transmembrane_regions (db=TMHMM db_id=tmhmm from=154 to=176)
ACD50_49_11
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

8122..8979
DNA (858bp) protein (286aa)
methyltransferase type 11
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=284 evalue=1.1e-46)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=52 to=244 evalue=3.4e-33)
UBIE/COQ5 METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10108:SF17 from=54 to=222 evalue=1.6e-26)
ACD50_49_12
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(9013..9828)
DNA (816bp) protein (272aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=106 to=120)
seg (db=Seg db_id=seg from=4 to=25)
SH3_3 (db=HMMPfam db_id=PF08239 from=219 to=267 evalue=1.4e-08 interpro_id=IPR013247 interpro_description=SH3, type 3)
ACD50_49_13
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(9944..11584)
DNA (1641bp) protein (547aa)
molecular chaperone GroEL
molecular chaperone GroEL
60 kDa chaperonin n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1N8_THERP (db=UNIREF evalue=0.0 bit_score=637.0 identity=63.5 coverage=97.0749542961609)
seg (db=Seg db_id=seg from=88 to=95)
ACD50_49_14
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(11589..11894)
DNA (306bp) protein (102aa)
Co-chaperonin GroES
no description (db=HMMSmart db_id=SM00883 from=9 to=101 evalue=2.4e-47 interpro_id=IPR001476 interpro_description=Chaperonin Cpn10, subgroup GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
GROES CHAPERONIN (db=HMMPanther db_id=PTHR10772 from=1 to=101 evalue=1.9e-35 interpro_id=IPR001476 interpro_description=Chaperonin Cpn10, subgroup GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
GroES-like (db=superfamily db_id=SSF50129 from=6 to=101 evalue=4.6e-33 interpro_id=IPR011032 interpro_description=GroES-like)
Displaying 14 items

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