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ACD50_57

Alias: ACD50_314200.2143.4

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_57_1

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comp(2..148)
DNA (147bp) protein (49aa)
2..148 - (rbs_motif=ATAAT rbs_spacer=6bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD65062.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD50_57_2

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comp(156..608)
DNA (453bp) protein (151aa)
156..608 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD65063.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD50_57_3

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comp(688..1143)
DNA (456bp) protein (152aa)
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=74 to=143 evalue=3.4e-09 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: r
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=59 to=140 evalue=3.5e-06 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
GerE (db=HMMPfam db_id=PF00196 from=84 to=135 evalue=1.6e-05 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=HMMSmart db_id=SM00421 from=83 to=140 evalue=0.0023 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
ACD50_57_4

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comp(1316..1792)
DNA (477bp) protein (159aa)
seg (db=Seg db_id=seg from=69 to=78)
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=84 to=153 evalue=3.7e-06 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: r
Uncharacterized protein {ECO:0000313|EMBL:EKD65060.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD50_57_5

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1858..2175
DNA (318bp) protein (106aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=104)
Uncharacterized protein {ECO:0000313|EMBL:EKD65061.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 5 items

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