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ACD50_59

Alias: ACD50_125488.7698.7

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_59_1
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(2..424)
DNA (423bp) protein (141aa)
putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
MurD-like peptide ligases, catalytic domain (db=superfamily db_id=SSF53623 from=29 to=139 evalue=9.8e-11 interpro_id=IPR013221 interpro_description=Mur ligase, central GO=Molecular Function: ATP binding (GO:0005524), Biological Process: biosynthetic process (GO:0009058))
no description (db=Gene3D db_id=G3DSA:3.40.1190.10 from=20 to=139 evalue=8.8e-08 interpro_id=IPR013221 interpro_description=Mur ligase, central GO=Molecular Function: ATP binding (GO:0005524), Biological Process: biosynthetic process (GO:0009058))
Mur_ligase_M (db=HMMPfam db_id=PF08245 from=35 to=139 evalue=8.1e-05 interpro_id=IPR013221 interpro_description=Mur ligase, central GO=Molecular Function: ATP binding (GO:0005524), Biological Process: biosynthetic process (GO:0009058))
ACD50_59_2
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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582..1022
DNA (441bp) protein (147aa)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=59 to=127 evalue=2.9e-06 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
lambda repressor-like DNA-binding domains 59..127 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_59_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(1100..1816)
DNA (717bp) protein (239aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=28 to=153 evalue=3.7e-21)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=27 to=120 evalue=3.8e-20)
REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT (db=HMMPanther db_id=PTHR11669 from=39 to=118 evalue=1.8e-15)
ACD50_59_4

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1846..3585
DNA (1740bp) protein (580aa)
hypothetical protein
hypothetical protein
type II secretion system protein E n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B268C (db=UNIREF evalue=2.0e-126 bit_score=456.0 identity=45.37 coverage=87.5862068965517)
seg (db=Seg db_id=seg from=57 to=68)
ACD50_59_5

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3589..4656
DNA (1068bp) protein (356aa)
twitching motility protein
twitching motility protein
twitching motility protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B268D (db=UNIREF evalue=2.0e-90 bit_score=335.0 identity=50.56 coverage=97.752808988764)
seg (db=Seg db_id=seg from=72 to=87)
ACD50_59_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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4659..5867
DNA (1209bp) protein (403aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=374 to=396)
transmembrane_regions (db=TMHMM db_id=tmhmm from=218 to=240)
transmembrane_regions (db=TMHMM db_id=tmhmm from=168 to=190)
ACD50_59_7
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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6001..6732
DNA (732bp) protein (244aa)
Rhs family protein
seg (db=Seg db_id=seg from=147 to=163)
Rhs_assc_core: RHS repeat-associated co (db=HMMTigr db_id=TIGR03696 from=24 to=103 evalue=1.8e-30 interpro_id=IPR022385 interpro_description=Rhs repeat-associated core)
Rhs family protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_59_8
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

6748..7101
DNA (354bp) protein (118aa)
seg (db=Seg db_id=seg from=8 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=97 to=116)
seg 8..20 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_59_9
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

7466..7732
DNA (267bp) protein (89aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=27)
seg (db=Seg db_id=seg from=39 to=60)
seg 39..60 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
Displaying 9 items

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