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ACD50_80

Alias: ACD50_362.8035.8

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_80_1
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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3..521
DNA (519bp) protein (173aa)
Phosphoribosyltransferase
seg (db=Seg db_id=seg from=71 to=104)
PRTase-like (db=superfamily db_id=SSF53271 from=4 to=171 evalue=3.9e-29)
Pribosyltran (db=HMMPfam db_id=PF00156 from=1 to=124 evalue=9.1e-13 interpro_id=IPR000836 interpro_description=Phosphoribosyltransferase GO=Biological Process: nucleoside metabolic process (GO:0009116))
ACD50_80_2

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523..1140
DNA (618bp) protein (206aa)
peptidyl-tRNA hydrolase
PEPT_TRNA_HYDROL_1 (db=PatternScan db_id=PS01195 from=14 to=27 evalue=0.0 interpro_id=IPR018171 interpro_description=Peptidyl-tRNA hydrolase, conserved site GO=Molecular Function: aminoacyl-tRNA hydrolase activity (GO:0004045), Biological Process: translation (GO:0006412))
PEPTIDYL-TRNA HYDROLASE (db=HMMPanther db_id=PTHR17224 from=1 to=204 evalue=4.0e-57 interpro_id=IPR001328 interpro_description=Peptidyl-tRNA hydrolase GO=Molecular Function: aminoacyl-tRNA hydrolase activity (GO:0004045), Biological Process: translation (GO:0006412))
Pept_tRNA_hydro (db=HMMPfam db_id=PF01195 from=3 to=203 evalue=2.8e-55 interpro_id=IPR001328 interpro_description=Peptidyl-tRNA hydrolase GO=Molecular Function: aminoacyl-tRNA hydrolase activity (GO:0004045), Biological Process: translation (GO:0006412))
ACD50_80_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(1133..2077)
DNA (945bp) protein (315aa)
1133..2077 - (rbs_motif=ATAAT rbs_spacer=11bp)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_80_4
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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2120..2392
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC1_9BACT (db=UNIREF evalue=3.0e-11 bit_score=70.9 identity=48.05 coverage=82.4175824175824)
seg (db=Seg db_id=seg from=77 to=90)
Putative uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
hypothetical protein
ACD50_80_5
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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2389..2913
DNA (525bp) protein (175aa)
hypothetical protein
SNARE associated Golgi protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B4D4_HERA2 (db=UNIREF evalue=1.0e-14 bit_score=82.4 identity=31.16 coverage=75.4285714285714)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=137 to=159)
ACD50_80_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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2924..3202
DNA (279bp) protein (93aa)
acylphosphatase (EC:3.6.1.7)
ACYLPHOSPHATASE_2 (db=PatternScan db_id=PS00151 from=32 to=48 evalue=0.0 interpro_id=IPR017968 interpro_description=Acylphosphatase, conserved site)
ACYLPHOSPHATASE_1 (db=PatternScan db_id=PS00150 from=8 to=18 evalue=0.0 interpro_id=IPR017968 interpro_description=Acylphosphatase, conserved site)
Acylphosphatase/BLUF domain-like (db=superfamily db_id=SSF54975 from=1 to=90 evalue=3.4e-29 interpro_id=IPR001792 interpro_description=Acylphosphatase-like)
ACD50_80_7
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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3195..3917
DNA (723bp) protein (241aa)
intracellular protease/amidase
no description (db=Gene3D db_id=G3DSA:3.40.50.880 from=8 to=239 evalue=4.6e-36)
Class I glutamine amidotransferase-like (db=superfamily db_id=SSF52317 from=7 to=239 evalue=8.4e-35)
DJ-1_PfpI (db=HMMPfam db_id=PF01965 from=85 to=233 evalue=4.2e-16 interpro_id=IPR002818 interpro_description=ThiJ/PfpI)
ACD50_80_8

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comp(3949..4719)
DNA (771bp) protein (257aa)
DSBA-like thioredoxin domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=11 to=27)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=55 to=256 evalue=1.5e-36 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
ACD50_80_9
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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4793..5494
DNA (702bp) protein (234aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Geobacter sp. M18 RepID=C6MSY4_9DELT (db=UNIREF evalue=2.0e-11 bit_score=72.8 identity=33.54 coverage=53.4188034188034)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=59)
seg (db=Seg db_id=seg from=40 to=56)
ACD50_80_10
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

5544..7115
DNA (1572bp) protein (524aa)
hypothetical protein cdiviTM7_02864 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2083 (db=UNIREF evalue=2.0e-31 bit_score=140.0 identity=24.46 coverage=99.236641221374)
transmembrane_regions (db=TMHMM db_id=tmhmm from=421 to=443)
transmembrane_regions (db=TMHMM db_id=tmhmm from=395 to=417)
transmembrane_regions (db=TMHMM db_id=tmhmm from=330 to=352)
ACD50_80_11
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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7164..7622
DNA (459bp) protein (153aa)
7164..7622 + (rbs_motif=ATGAT rbs_spacer=9bp)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_80_12

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7809..8069
DNA (261bp) protein (87aa)
thioredoxin
THIOREDOXIN_1 (db=PatternScan db_id=PS00194 from=23 to=41 evalue=0.0 interpro_id=IPR017937 interpro_description=Thioredoxin, conserved site GO=Biological Process: cell redox homeostasis (GO:0045454))
THIOREDOXIN M(MITOCHONDRIAL)-TYPE (db=HMMPanther db_id=PTHR10438:SF13 from=12 to=86 evalue=2.2e-40)
THIOREDOXIN-RELATED (db=HMMPanther db_id=PTHR10438 from=12 to=86 evalue=2.2e-40 interpro_id=IPR015467 interpro_description=Thioredoxin, core GO=Biological Process: cell redox homeostasis (GO:0045454))
Displaying 12 items

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