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ACD50_82

Alias: ACD50_53207.13214.9

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_82_1
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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2..508
DNA (507bp) protein (169aa)
trehalose-6-phosphate synthase
Glyco_transf_20 (db=HMMPfam db_id=PF00982 from=1 to=164 evalue=6.4e-49 interpro_id=IPR001830 interpro_description=Glycosyl transferase, family 20 GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: trehalose biosynthetic process (GO:0005992))
TREHALOSE-6-PHOSPHATE SYNTHASE (db=HMMPanther db_id=PTHR10788 from=1 to=162 evalue=8.0e-44)
no description (db=Gene3D db_id=G3DSA:3.40.50.2000 from=1 to=148 evalue=1.9e-40)
ACD50_82_2
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(525..1466)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JGX3_9ARCH (db=UNIREF evalue=2.0e-12 bit_score=77.0 identity=25.14 coverage=95.859872611465)
hypothetical protein
seg (db=Seg db_id=seg from=81 to=95)
coiled-coil (db=Coil db_id=coil from=79 to=100 evalue=NA)
ACD50_82_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

1514..2134
DNA (621bp) protein (207aa)
hypothetical protein
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=21 to=199 evalue=4.7e-28)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=16 to=144 evalue=2.2e-24)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=28 to=115 evalue=2.7e-19 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
ACD50_82_4
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(2140..2787)
DNA (648bp) protein (216aa)
type 11 methyltransferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=24 to=154 evalue=1.3e-26)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=47 to=194 evalue=2.2e-23)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=62 to=157 evalue=2.4e-20 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
ACD50_82_5
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(2784..3869)
DNA (1086bp) protein (362aa)
CgeB family protein
CgeB family protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
CgeB family protein; K06320 spore maturation protein CgeB alias=ACD50_53207.13214.9G0005,ACD50_53207.13214.9_5,ACD50_C00082G00005 id=72100 tax=ACD50 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
ACD50_82_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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3938..4903
DNA (966bp) protein (322aa)
hypothetical protein
Galactose-1-phosphate uridylyltransferase n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLB2_9CYAN (db=UNIREF evalue=5.0e-32 bit_score=142.0 identity=30.52 coverage=91.304347826087)
HIT-like (db=superfamily db_id=SSF54197 from=6 to=149 evalue=5.6e-25 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE (db=HMMPanther db_id=PTHR11943 from=11 to=309 evalue=8.0e-24 interpro_id=IPR001937 interpro_description=Galactose-1-phosphate uridyl transferase, class I GO=Biological Process: galactose metabolic process (GO:0006012), Molecular Function: UDP-glucose:hexose-1-phosphate uridylyltransferase activity (GO:0008108), Molecular Function: zinc ion binding (GO:0008270))
ACD50_82_7
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(4923..5714)
DNA (792bp) protein (264aa)
seg (db=Seg db_id=seg from=11 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30)
transmembrane_regions 13..30 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_82_8
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(5716..6762)
DNA (1047bp) protein (349aa)
seg (db=Seg db_id=seg from=330 to=342)
seg (db=Seg db_id=seg from=80 to=90)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
ACD50_82_9

Not on your lists

7059..8600
DNA (1542bp) protein (514aa)
two-component sensor histidine kinase
coiled-coil (db=Coil db_id=coil from=116 to=151 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=239 to=261)
ACD50_82_10
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

8651..9055
DNA (405bp) protein (135aa)
Response regulator receiver domain-containing protein (CheY)
CheY-like (db=superfamily db_id=SSF52172 from=3 to=133 evalue=7.8e-23 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=4 to=122 evalue=2.6e-17)
Response_reg (db=HMMPfam db_id=PF00072 from=8 to=113 evalue=4.6e-16 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD50_82_11

Not on your lists

9024..9416
DNA (393bp) protein (131aa)
response regulator receiver sensor signal transduction histidine kinase
CheY-like (db=superfamily db_id=SSF52172 from=8 to=113 evalue=8.5e-32 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=5 to=113 evalue=7.1e-28)
no description (db=HMMSmart db_id=SM00448 from=11 to=125 evalue=8.4e-27 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD50_82_12

Not on your lists

9424..9816
DNA (393bp) protein (131aa)
two-component response regulator
CheY-like (db=superfamily db_id=SSF52172 from=1 to=121 evalue=1.4e-30 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=2 to=120 evalue=2.2e-26)
no description (db=HMMSmart db_id=SM00448 from=2 to=116 evalue=1.3e-23 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD50_82_13
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

9828..11513
DNA (1686bp) protein (562aa)
type II secretion system protein E
type II secretion system protein E
Type IV pilus assembly protein PilB n=1 Tax=Deferribacter desulfuricans SSM1 RepID=D3PDA5_DEFDS (db=UNIREF evalue=1.0e-118 bit_score=431.0 identity=40.07 coverage=97.153024911032)
T2SP_E (db=PatternScan db_id=PS00662 from=373 to=387 evalue=0.0 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
ACD50_82_14
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

11516..12562
DNA (1047bp) protein (349aa)
type II secretion system F domain-containing protein
MSHA biogenesis protein MshG n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P2U2_VIBME (db=UNIREF evalue=2.0e-49 bit_score=199.0 identity=32.21 coverage=84.5272206303725)
transmembrane_regions (db=TMHMM db_id=tmhmm from=166 to=185)
transmembrane_regions (db=TMHMM db_id=tmhmm from=112 to=134)
ACD50_82_15
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

12693..13127
DNA (435bp) protein (145aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=8 to=28)
Pili subunits (db=superfamily db_id=SSF54523 from=9 to=55 evalue=1.2e-06)
transmembrane_regions 7..29 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_82_16
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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13137..13247
DNA (111bp) protein (37aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=12 to=35 evalue=0.0031 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
carbohydrate binding family 6 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
Displaying 16 items

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