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ACD50_84

Alias: ACD50_10598.12626.9

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_84_1

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1..498
DNA (498bp) protein (166aa)
hypothetical protein
DUF458 (db=HMMPfam db_id=PF04308 from=15 to=165 evalue=1.0e-42 interpro_id=IPR007405 interpro_description=Protein of unknown function DUF458, RNase H-like)
Uncharacterized protein {ECO:0000313|EMBL:EKD65711.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K09776 hypothetical protein alias=ACD50_C00084G00001,ACD50_10598.12626.9G0001,ACD50_10598.12626.9_1 id=72119 tax=ACD50 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
ACD50_84_2
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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544..942
DNA (399bp) protein (133aa)
metallopeptidase-like protein
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
seg (db=Seg db_id=seg from=76 to=92)
metallopeptidase-like protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_84_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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939..1634
DNA (696bp) protein (232aa)
DNA polymerase III clamp loader subunits, C-terminal domain (db=superfamily db_id=SSF48019 from=115 to=214 evalue=1.7e-07 interpro_id=IPR008921 interpro_description=DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA replication (GO:0006260))
DNA polymerase III clamp loader subunits, C-terminal domain 115..214 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_84_4
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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1665..3038
DNA (1374bp) protein (458aa)
Phosphomannomutase
Phosphomannomutase
Phosphomannomutase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B8V1_THEAS (db=UNIREF evalue=7.0e-93 bit_score=345.0 identity=43.16 coverage=93.2314410480349)
seg (db=Seg db_id=seg from=430 to=446)
ACD50_84_5
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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3004..4161
DNA (1158bp) protein (386aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=13 to=313 evalue=9.5e-29)
PPDK_N (db=HMMPfam db_id=PF01326 from=106 to=249 evalue=1.9e-08 interpro_id=IPR002192 interpro_description=Pyruvate phosphate dikinase, PEP/pyruvate-binding GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: kinase activity (GO:0016301), Biological Process: phosphorylation (GO:0016310))
no description (db=Gene3D db_id=G3DSA:3.50.30.10 from=274 to=385 evalue=2.2e-06 interpro_id=IPR008279 interpro_description=PEP-utilising enzyme, mobile domain GO=Biological Process: phosphorylation (GO:0016310), Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772))
ACD50_84_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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4158..4772
DNA (615bp) protein (205aa)
phosphoglyceromutase
PG_MUTASE (db=PatternScan db_id=PS00175 from=6 to=15 evalue=0.0 interpro_id=IPR001345 interpro_description=Phosphoglycerate/bisphosphoglycerate mutase, active site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
PHOSPHOGLYCERATE MUTASE (db=HMMPanther db_id=PTHR11931 from=1 to=196 evalue=4.9e-71 interpro_id=IPR005952 interpro_description=Phosphoglycerate mutase 1 GO=Biological Process: glycolysis (GO:0006096), Molecular Function: intramolecular transferase activity, phosphotransferases (GO:0016868))
no description (db=Gene3D db_id=G3DSA:3.40.50.1240 from=2 to=197 evalue=8.3e-60)
ACD50_84_7
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(4765..5463)
DNA (699bp) protein (233aa)
tetrapyrrole methylase
RSMI (db=PatternScan db_id=PS01296 from=87 to=98 evalue=0.0 interpro_id=IPR018063 interpro_description=Uncharacterised protein family UPF0011, conserved site)
Tetrapyrrole methylase (db=superfamily db_id=SSF53790 from=1 to=232 evalue=1.7e-78 interpro_id=IPR000878 interpro_description=Tetrapyrrole methylase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
S-ADENOSYLMETHIONINE-DEPENDENT METHYTRANSFERASE (db=HMMPanther db_id=PTHR21091:SF18 from=50 to=232 evalue=8.8e-53)
ACD50_84_8
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(5473..6105)
DNA (633bp) protein (211aa)
hypothetical protein
Similar to alkaline phosphatase PhoA n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q7H6_9BACT (db=UNIREF evalue=3.0e-31 bit_score=138.0 identity=53.67 coverage=83.4123222748815)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=91)
seg (db=Seg db_id=seg from=198 to=209)
ACD50_84_9
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(6146..6772)
DNA (627bp) protein (209aa)
lexA; LexA repressor (EC:3.4.21.88)
lexA: repressor LexA (db=HMMTigr db_id=TIGR00498 from=2 to=208 evalue=7.3e-45 interpro_id=IPR006200 interpro_description=Peptidase S24, LexA repressor GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
LexA/Signal peptidase (db=superfamily db_id=SSF51306 from=84 to=207 evalue=4.2e-31 interpro_id=IPR015927 interpro_description=Peptidase S24/S26A/S26B/S26C)
no description (db=Gene3D db_id=G3DSA:2.10.109.10 from=91 to=206 evalue=6.3e-30 interpro_id=IPR011056 interpro_description=Peptidase S24/S26A/S26B/S26C, beta-ribbon domain)
ACD50_84_10
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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6865..8850
DNA (1986bp) protein (662aa)
hypothetical protein
hypothetical protein
UvrABC system protein B n=9 Tax=Thermoanaerobacter RepID=UVRB_THETN (db=UNIREF evalue=0.0 bit_score=772.0 identity=59.18 coverage=98.3383685800604)
coiled-coil (db=Coil db_id=coil from=613 to=642 evalue=NA)
ACD50_84_11
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(8847..9224)
DNA (378bp) protein (126aa)
hypothetical protein
Putative endonuclease n=1 Tax=Parascardovia denticolens F0305 RepID=D6L7K3_PARDN (db=UNIREF evalue=6.0e-18 bit_score=92.8 identity=41.32 coverage=92.0634920634921)
UPF0102 (db=HMMPfam db_id=PF02021 from=11 to=106 evalue=1.1e-22 interpro_id=IPR003509 interpro_description=Uncharacterised protein family UPF0102)
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=9 to=116 evalue=5.5e-20 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
ACD50_84_12
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(9224..9505)
DNA (282bp) protein (94aa)
rplS; 50S ribosomal protein L19
Ribosomal_L19 (db=HMMPfam db_id=PF01245 from=5 to=92 evalue=3.6e-29 interpro_id=IPR001857 interpro_description=Ribosomal protein L19 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Translation proteins SH3-like domain (db=superfamily db_id=SSF50104 from=6 to=93 evalue=1.6e-21 interpro_id=IPR008991 interpro_description=Translation protein SH3-like)
RIBOSOMAL PROTEIN L19 (db=HMMPanther db_id=PTHR15680 from=1 to=93 evalue=3.3e-21 interpro_id=IPR001857 interpro_description=Ribosomal protein L19 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD50_84_13
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(9502..11133)
DNA (1632bp) protein (544aa)
pyrG; CTP synthetase (EC:6.3.4.2)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=10 Tax=Thermoanaerobacteraceae RepID=PYRG_THETN (db=UNIREF evalue=2.0e-120 bit_score=436.0 identity=47.51 coverage=97.4264705882353)
seg (db=Seg db_id=seg from=284 to=299)
ACD50_84_14

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11257..12600
DNA (1344bp) protein (448aa)
seg (db=Seg db_id=seg from=417 to=431)
seg (db=Seg db_id=seg from=284 to=304)
seg (db=Seg db_id=seg from=262 to=280)
seg (db=Seg db_id=seg from=216 to=231)
Displaying 14 items

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