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ACD50_120

Alias: ACD50_443538.5276.8

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_120_1
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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3..224
DNA (222bp) protein (74aa)
3..224 + (rbs_motif=None rbs_spacer=None)
SAM-dependent methyltransferase Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_120_2

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402..1502
DNA (1101bp) protein (367aa)
GTP-binding protein YchF
GTP-binding protein YchF
GTP-binding protein YchF n=3 Tax=Clostridium thermocellum RepID=A3DDT2_CLOTH (db=UNIREF evalue=1.0e-93 bit_score=347.0 identity=52.83 coverage=98.3651226158038)
GTP-BINDING PROTEIN (db=HMMPanther db_id=PTHR23305:SF4 from=1 to=366 evalue=8.3e-161 interpro_id=IPR004396 interpro_description=Conserved hypothetical protein CHP00092 GO=Molecular Function: GTP binding (GO:0005525))
ACD50_120_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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1809..2627
DNA (819bp) protein (273aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
seg (db=Seg db_id=seg from=193 to=206)
D_2_HYDROXYACID_DH_1 (db=PatternScan db_id=PS00065 from=79 to=106 evalue=0.0 interpro_id=IPR006140 interpro_description=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: cofactor binding (GO:0048037))
D_2_HYDROXYACID_DH_3 (db=PatternScan db_id=PS00671 from=156 to=172 evalue=0.0 interpro_id=IPR006140 interpro_description=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: cofactor binding (GO:0048037))
ACD50_120_4
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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2661..2939
DNA (279bp) protein (93aa)
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=2 to=90 evalue=3.5e-20 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=1 to=92 evalue=8.5e-20 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
no description (db=Gene3D db_id=G3DSA:3.30.70.60 from=1 to=92 evalue=2.2e-17 interpro_id=IPR014717 interpro_description=Translation elongation factor EF1B/ribosomal protein S6)
S6: ribosomal protein S6 (db=HMMTigr db_id=TIGR00166 from=1 to=92 evalue=8.8e-16 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD50_120_5
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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3056..3553
DNA (498bp) protein (166aa)
hypothetical protein
seg (db=Seg db_id=seg from=123 to=156)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=3 to=165 evalue=4.0e-51 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
ssb: single-strand binding protein (db=HMMTigr db_id=TIGR00621 from=3 to=165 evalue=1.3e-50 interpro_id=IPR011344 interpro_description=Single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697), Biological Process: DNA replication (GO:0006260))
ACD50_120_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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3555..3791
DNA (237bp) protein (79aa)
rpsR; 30S ribosomal protein S18
S18: ribosomal protein S18 (db=HMMTigr db_id=TIGR00165 from=11 to=77 evalue=7.5e-18 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S18 (db=HMMPfam db_id=PF01084 from=22 to=74 evalue=2.1e-17 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479 from=1 to=77 evalue=2.6e-16 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD50_120_7
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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3793..5064
DNA (1272bp) protein (424aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B9Q8_9BACI (db=UNIREF evalue=7.0e-68 bit_score=261.0 identity=37.11 coverage=83.2547169811321)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
prc: C-terminal processing peptidase (db=HMMTigr db_id=TIGR00225 from=66 to=420 evalue=2.5e-85 interpro_id=IPR004447 interpro_description=Peptidase S41A, C-terminal peptidase GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type peptidase activity (GO:0008236))
Displaying 7 items

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