Alias: ACD50_57887.4863.7
name | lists | location/seqs | annotations | notes |
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ACD50_132_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(3..125)
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3..125 - (rbs_motif=AAT rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD64686.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD50_132_2
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
231..1058
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C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=56 to=152 evalue=8.4e-11 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: r
Trans_reg_C (db=HMMPfam db_id=PF00486 from=78 to=150 evalue=3.3e-07 interpro_id=IPR001867 interpro_description=Signal transduction response regulator, C-terminal GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=57 to=153 evalue=5.4e-06 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=166 to=268 evalue=1.9e-05 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process:
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ACD50_132_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
1065..1568
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C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=52 to=156 evalue=5.2e-09 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: r
Trans_reg_C (db=HMMPfam db_id=PF00486 from=81 to=156 evalue=1.9e-06 interpro_id=IPR001867 interpro_description=Signal transduction response regulator, C-terminal GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=51 to=159 evalue=4.0e-05 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
C-terminal effector domain of the bipartite response regulators 52..156 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
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ACD50_132_4
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(1576..3024)
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Glycoside hydrolase family 18
Glycosyl hydrolase, family 18 n=1 Tax=uncultured marine bacterium 159 RepID=Q6SHW7_9BACT (db=UNIREF evalue=1.0e-33 bit_score=148.0 identity=31.36 coverage=66.0455486542443)
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=86)
CHITINASE_18 (db=PatternScan db_id=PS01095 from=262 to=270 evalue=0.0 interpro_id=IPR001579 interpro_description=Glycoside hydrolase, chitinase active site GO=Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolic process (GO:0005975))
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ACD50_132_5
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
3135..4070
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hypothetical protein
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=115 to=308 evalue=1.7e-51 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=120 to=304 evalue=7.2e-51 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
Phage_integrase (db=HMMPfam db_id=PF00589 from=120 to=297 evalue=1.1e-40 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
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ACD50_132_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
4096..4602
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seg (db=Seg db_id=seg from=94 to=106)
seg 94..106 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
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ACD50_132_7
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(4607..4897)
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4607..4897 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
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