Alias: ACD50_3019.6501.9
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD50_136_1
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(2..121)
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transcriptional regulator
YebC-like (db=superfamily db_id=SSF75625 from=3 to=40 evalue=2.7e-11 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
DUF28 (db=HMMPfam db_id=PF01709 from=5 to=40 evalue=2.4e-10 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
no description (db=Gene3D db_id=G3DSA:1.10.10.200 from=1 to=40 evalue=1.5e-08 interpro_id=IPR017856 interpro_description=Integrase, N-terminal zinc-binding domain-like)
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ACD50_136_2
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
188..871
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TPR repeat-containing protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D4Y0Z0_9CHLR (db=UNIREF evalue=3.0e-26 bit_score=122.0 identity=36.41 coverage=84.6491228070175)
hypothetical protein
TPR-like (db=superfamily db_id=SSF48452 from=5 to=85 evalue=7.5e-12)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=5 to=74 evalue=4.8e-08 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
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ACD50_136_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(863..1669)
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seg (db=Seg db_id=seg from=51 to=66)
seg (db=Seg db_id=seg from=15 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
transmembrane_regions 17..39 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
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ACD50_136_4
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(1715..1852)
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seg (db=Seg db_id=seg from=9 to=27)
seg 9..27 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
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ACD50_136_5
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(1906..2655)
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pseudouridylate synthase, 23S rRNA-specific (EC:4.2.1.70)
Pseudouridine synthase n=25 Tax=root RepID=C0X5V9_ENTFA (db=UNIREF evalue=1.0e-37 bit_score=160.0 identity=38.99 coverage=78.4)
seg (db=Seg db_id=seg from=229 to=240)
PSI_RLU (db=PatternScan db_id=PS01129 from=69 to=83 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
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ACD50_136_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(2676..3395)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
seg (db=Seg db_id=seg from=81 to=96)
seg (db=Seg db_id=seg from=60 to=80)
seg (db=Seg db_id=seg from=43 to=57)
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ACD50_136_7
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(3403..4626)
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major facilitator family transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=358 to=380)
transmembrane_regions (db=TMHMM db_id=tmhmm from=384 to=406)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=131)
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ACD50_136_8
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(4630..5184)
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efp; elongation factor P
EFP (db=PatternScan db_id=PS01275 from=149 to=168 evalue=0.0 interpro_id=IPR013852 interpro_description=Translation elongation factor P/YeiP, conserved site)
efp: translation elongation factor P (db=HMMTigr db_id=TIGR00038 from=2 to=184 evalue=8.1e-71 interpro_id=IPR011768 interpro_description=Translation elongation factor P GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: cytoplasm (GO:0005737), Biological Process: translational elongation (GO:0006414))
Translation elongation factor P (db=HMMPIR db_id=PIRSF005901 from=1 to=183 evalue=4.1e-25 interpro_id=IPR020599 interpro_description=Translation elongation factor P/YeiP)
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ACD50_136_9
uncultured bacterium, Bacteria
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Not on your lists |
comp(5177..6535)
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hypothetical protein
PUROMYCIN-SENSITIVE AMINOPEPTIDASE (db=HMMPanther db_id=PTHR11533:SF33 from=1 to=447 evalue=7.9e-117 interpro_id=IPR015568 interpro_description=Peptidase M1, puromycin-sensitive aminopeptidase)
PROTEASE M1 ZINC METALLOPROTEASE (db=HMMPanther db_id=PTHR11533 from=1 to=447 evalue=7.9e-117 interpro_id=IPR001930 interpro_description=Peptidase M1, membrane alanine aminopeptidase GO=Biological Process: proteolysis (GO:0006508))
Metalloproteases ("zincins"), catalytic domain (db=superfamily db_id=SSF55486 from=1 to=56 evalue=2.0e-14)
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