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ACD50_149

Alias: ACD50_142183.2860.5

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_149_1
GWA1_OP11_37_16, Levybacteria, Microgenomates, Bacteria

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comp(3..476)
DNA (474bp) protein (158aa)
peptide chain release factor 1
seg (db=Seg db_id=seg from=113 to=125)
coiled-coil (db=Coil db_id=coil from=29 to=50 evalue=NA)
PEPTIDE CHAIN RELEASE FACTOR 1 (db=HMMPanther db_id=PTHR11075:SF9 from=8 to=158 evalue=7.5e-44)
ACD50_149_2
GWB1_OP11_37_8, Levybacteria, Microgenomates, Bacteria

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comp(486..788)
DNA (303bp) protein (101aa)
50S ribosomal protein L31
L31: ribosomal protein L31 (db=HMMTigr db_id=TIGR00105 from=1 to=67 evalue=7.0e-28 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L31 (db=HMMPfam db_id=PF01197 from=1 to=63 evalue=5.0e-26 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L28p-like (db=superfamily db_id=SSF143800 from=1 to=70 evalue=5.2e-21)
ACD50_149_3
GWA1_OP11_37_16, Levybacteria, Microgenomates, Bacteria

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comp(810..1406)
DNA (597bp) protein (199aa)
Suspect SCG annotation. See neighboring gene [ACD50_149_4].
histidyl-tRNA synthetase (EC:6.1.1.21)
seg (db=Seg db_id=seg from=54 to=64)
HISTIDYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11476 from=10 to=197 evalue=1.6e-55 interpro_id=IPR004516 interpro_description=Histidyl-tRNA synthetase, class IIa GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
ACD50_149_4
Microgenomates bacterium GW2011_GWC1_39_7, Microgenomates, Bacteria

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comp(1417..2040)
DNA (624bp) protein (208aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
seg (db=Seg db_id=seg from=196 to=206)
HISTIDYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11476 from=1 to=195 evalue=8.6e-66 interpro_id=IPR004516 interpro_description=Histidyl-tRNA synthetase, class IIa GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=2 to=192 evalue=3.6e-54)
ACD50_149_5
GWA1_OP11_37_16, Levybacteria, Microgenomates, Bacteria

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comp(2054..2755)
DNA (702bp) protein (234aa)
D-alanyl-D-alanine dipeptidase
Hedgehog/DD-peptidase (db=superfamily db_id=SSF55166 from=27 to=221 evalue=1.5e-33 interpro_id=IPR009045 interpro_description=Hedgehog/DD-peptidase, zinc-binding motif)
no description (db=Gene3D db_id=G3DSA:3.30.1380.10 from=27 to=208 evalue=1.5e-25)
Peptidase_M15 (db=HMMPfam db_id=PF01427 from=55 to=210 evalue=3.1e-21 interpro_id=IPR000755 interpro_description=Peptidase M15D, vanX D-ala-D-ala dipeptidase GO=Cellular Component: cell wall (GO:0005618), Biological Process: proteolysis (GO:0006508), Molecular Function: metallopeptidase activity (GO:0008237), Molecular Function: dipeptidase activity (GO:0016805))
ACD50_149_6
GWA1_OP11_37_16, Levybacteria, Microgenomates, Bacteria

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comp(2752..2892)
DNA (141bp) protein (47aa)
2752..2892 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKQ27674.1}; Flags: Fragment;; TaxID=1618452 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA1_37_16.;"
Displaying 6 items

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