Alias: ACD50_191600.6378.9
name | lists | location/seqs | annotations | notes |
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ACD50_174_1
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(1..456)
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rpsI; 30S ribosomal protein S9
seg (db=Seg db_id=seg from=89 to=103)
RIBOSOMAL_S9 (db=PatternScan db_id=PS00360 from=95 to=113 evalue=0.0 interpro_id=IPR020574 interpro_description=Ribosomal protein S9, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S9 (db=HMMPfam db_id=PF00380 from=26 to=152 evalue=5.5e-28 interpro_id=IPR000754 interpro_description=Ribosomal protein S9 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD50_174_2
uncultured bacterium, Bacteria
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Not on your lists |
comp(469..912)
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50S ribosomal protein L13
seg (db=Seg db_id=seg from=55 to=69)
seg (db=Seg db_id=seg from=2 to=13)
rplM_bact: ribosomal protein L13 (db=HMMTigr db_id=TIGR01066 from=4 to=144 evalue=3.6e-56 interpro_id=IPR005823 interpro_description=Ribosomal protein L13, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD50_174_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(909..1466)
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rplQ; 50S ribosomal protein L17
seg (db=Seg db_id=seg from=165 to=177)
seg (db=Seg db_id=seg from=40 to=57)
RIBOSOMAL_L17 (db=PatternScan db_id=PS01167 from=34 to=56 evalue=0.0 interpro_id=IPR000456 interpro_description=Ribosomal protein L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD50_174_4
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(1560..2483)
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rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
seg (db=Seg db_id=seg from=75 to=87)
coiled-coil (db=Coil db_id=coil from=65 to=86 evalue=NA)
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=17 to=307 evalue=3.5e-101 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351))
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ACD50_174_5
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(2500..3105)
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rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 n=5 Tax=Bacteroidales RepID=RS4_PARD8 (db=UNIREF evalue=1.0e-44 bit_score=182.0 identity=47.78 coverage=99.009900990099)
RIBOSOMAL_S4 (db=PatternScan db_id=PS00632 from=92 to=116 evalue=0.0 interpro_id=IPR018079 interpro_description=Ribosomal protein S4, conserved site GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843))
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=201 evalue=1.1e-82 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
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ACD50_174_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(3105..3476)
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30S ribosomal protein S11
seg (db=Seg db_id=seg from=56 to=70)
RIBOSOMAL_S11 (db=PatternScan db_id=PS00054 from=91 to=113 evalue=0.0 interpro_id=IPR018102 interpro_description=Ribosomal S11, conserved site)
bact_S11: 30S ribosomal protein S11 (db=HMMTigr db_id=TIGR03632 from=4 to=120 evalue=2.8e-62 interpro_id=IPR019981 interpro_description=Ribosomal protein S11, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD50_174_7
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(3484..3891)
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rpsM; 30S ribosomal protein S13
bact_S13: 30S ribosomal protein S13 (db=HMMTigr db_id=TIGR03631 from=2 to=113 evalue=6.2e-58 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S13 (db=HMMPanther db_id=PTHR10871:SF1 from=1 to=122 evalue=1.0e-42)
30S/40S RIBOSOMAL PROTEIN (db=HMMPanther db_id=PTHR10871 from=1 to=122 evalue=1.0e-42)
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ACD50_174_8
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(4007..4225)
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translation initiation factor IF-1
infA: translation initiation factor IF-1 (db=HMMTigr db_id=TIGR00008 from=3 to=71 evalue=1.4e-31 interpro_id=IPR004368 interpro_description=Translation initiation factor IF-1 GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=71 evalue=1.2e-26 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=1 to=71 evalue=1.9e-23 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
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ACD50_174_9
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(4395..5153)
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methionine aminopeptidase (EC:3.4.11.18)
met_pdase_I: methionine aminopeptidase, t (db=HMMTigr db_id=TIGR00500 from=2 to=252 evalue=3.2e-80 interpro_id=IPR002467 interpro_description=Peptidase M24A, methionine aminopeptidase, subfamily 1 GO=Molecular Function: aminopeptidase activity (GO:0004177), Biological Process: proteolysis (GO:0006508), Molecular Function: metalloexopeptidase activity (GO:0008235))
no description (db=Gene3D db_id=G3DSA:3.90.230.10 from=1 to=250 evalue=6.2e-69 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
Creatinase/aminopeptidase (db=superfamily db_id=SSF55920 from=1 to=252 evalue=1.2e-65 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
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ACD50_174_10
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(5150..5752)
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hypothetical protein
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=178 evalue=6.5e-20)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
hypothetical protein alias=ACD50_191600.6378.9G0010,ACD50_191600.6378.9_10,ACD50_C00174G00010 id=72742 tax=ACD50 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi organism_group=OP11 organism_desc=OP11
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ACD50_174_11
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(5755..6300)
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adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Coprococcus catus GD/7 RepID=D4J752_9FIRM (db=UNIREF evalue=7.0e-33 bit_score=143.0 identity=35.24 coverage=95.6043956043956)
ADENYLATE_KINASE (db=PatternScan db_id=PS00113 from=81 to=92 evalue=0.0 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=177 evalue=1.9e-46)
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