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ACD50_191

Alias: ACD50_151636.2139.4

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_191_1
GWC1_OP11_37_12b, Microgenomates, Bacteria

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comp(2..85)
DNA (84bp) protein (28aa)
seg (db=Seg db_id=seg from=10 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=6 to=26 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=5 to=28 evalue=2.7e-09 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
ACD50_191_2

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comp(254..709)
DNA (456bp) protein (152aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=145)
GSPII_F (db=HMMPfam db_id=PF00482 from=20 to=143 evalue=3.0e-28 interpro_id=IPR018076 interpro_description=Type II secretion system F domain)
BCTERIALGSPF (db=FPrintScan db_id=PR00812 from=16 to=28 evalue=1.8e-05 interpro_id=IPR003004 interpro_description=Bacterial general secretion pathway protein F GO=Molecular Function: protein transporter activity (GO:0008565), Cellular Component: type II protein secretion system complex (GO:0015627), Biological Process: protein secretion by the type II secretion system (GO:0015628))
ACD50_191_3
GWA1_OP11, Woesebacteria, Microgenomates, Bacteria

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comp(753..1265)
DNA (513bp) protein (171aa)
hypothetical protein
seg (db=Seg db_id=seg from=154 to=169)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=115)
GSPII_F (db=HMMPfam db_id=PF00482 from=1 to=116 evalue=4.1e-27 interpro_id=IPR018076 interpro_description=Type II secretion system F domain)
ACD50_191_4

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comp(1557..2171)
DNA (615bp) protein (205aa)
twitching motility protein
twitching motility protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B268D (db=UNIREF evalue=8.0e-53 bit_score=209.0 identity=54.77 coverage=96.5853658536585)
seg (db=Seg db_id=seg from=61 to=72)
T2SP_E (db=PatternScan db_id=PS00662 from=45 to=59 evalue=0.0 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
Displaying 4 items

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