Alias: ACD51_41507.25284.10
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD51_10_1
uncultured bacterium, Bacteria
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Not on your lists |
2..274
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transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=57)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
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ACD51_10_2
uncultured bacterium, Bacteria
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Not on your lists |
comp(260..691)
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260..691 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD63798.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD51_10_3
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
1510..2406
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phage integrase family protein
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=107 to=296 evalue=8.6e-41 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=112 to=293 evalue=3.3e-37 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
Phage_integrase (db=HMMPfam db_id=PF00589 from=128 to=282 evalue=2.2e-31 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
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ACD51_10_4
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(2403..3293)
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hypothetical protein
seg (db=Seg db_id=seg from=261 to=279)
hypothetical protein alias=ACD51_C00010G00004,ACD51_41507.25284.10G0004,ACD51_41507.25284.10_4 id=73202 tax=ACD51 species=Methylovorus glucosotrophus genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=PER organism_desc=PER
hypothetical protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
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ACD51_10_5
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(3798..4751)
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Integrase/recombinase, phage integrase family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LMG0_9FIRM (db=UNIREF evalue=2.0e-18 bit_score=97.1 identity=29.57 coverage=66.0377358490566)
tyrosine recombinase xerd
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=123 to=301 evalue=8.4e-31 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=129 to=301 evalue=3.3e-25 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
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ACD51_10_6
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(4851..5477)
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4851..5477 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
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ACD51_10_7
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
5753..7138
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middle cell wall protein
S-layer domain protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5B0_PAESJ (db=UNIREF evalue=6.0e-17 bit_score=92.8 identity=33.17 coverage=40.4761904761905)
seg (db=Seg db_id=seg from=228 to=239)
no description (db=Gene3D db_id=G3DSA:2.40.50.90 from=228 to=348 evalue=1.2e-26 interpro_id=IPR006021 interpro_description=Staphylococcal nuclease (SNase-like) GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
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ACD51_10_8
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
7203..7520
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7203..7520 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
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ACD51_10_9
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
7520..8071
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7520..8071 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
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ACD51_10_10
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(8162..9085)
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seg (db=Seg db_id=seg from=248 to=259)
transmembrane_regions (db=TMHMM db_id=tmhmm from=228 to=245)
transmembrane_regions (db=TMHMM db_id=tmhmm from=252 to=274)
seg 248..259 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
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ACD51_10_11
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(9337..9873)
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coiled-coil (db=Coil db_id=coil from=95 to=116 evalue=NA)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=6.0)
coiled-coil 95..116 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
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ACD51_10_12
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(9892..10302)
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Putative uncharacterized protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PHE1_VIBFU (db=UNIREF evalue=5.0e-36 bit_score=152.0 identity=51.47 coverage=97.0802919708029)
hypothetical protein
DUF2000 (db=HMMPfam db_id=PF09391 from=4 to=135 evalue=2.9e-34 interpro_id=IPR018988 interpro_description=Protein of unknown function DUF2000)
Uncharacterised conserved protein, UCP033763 type (db=HMMPIR db_id=PIRSF033736 from=1 to=136 evalue=9.9e-27 interpro_id=IPR017021 interpro_description=Uncharacterised conserved protein UCP033763)
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ACD51_10_13
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
10585..12285
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ABC transporter related protein
ABC transporter related protein
ABC transporter related protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRV6_SPILD (db=UNIREF evalue=9.0e-102 bit_score=374.0 identity=36.81 coverage=98.5890652557319)
transmembrane_regions (db=TMHMM db_id=tmhmm from=162 to=184)
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ACD51_10_14
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
12380..13303
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12380..13303 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
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ACD51_10_15
uncultured bacterium, Bacteria
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Not on your lists |
comp(13272..14438)
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glutaredoxin
Glutaredoxin domain protein n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GNB4_9FUSO (db=UNIREF evalue=2.0e-72 bit_score=276.0 identity=39.17 coverage=96.1439588688946)
transmembrane_regions (db=TMHMM db_id=tmhmm from=363 to=381)
transmembrane_regions (db=TMHMM db_id=tmhmm from=329 to=351)
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ACD51_10_16
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(14561..14788)
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seg (db=Seg db_id=seg from=6 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
seg 6..26 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
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ACD51_10_17
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(14798..15175)
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S23 ribosomal protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745E75 (db=UNIREF evalue=6.0e-28 bit_score=126.0 identity=51.28 coverage=89.6825396825397)
S23 ribosomal protein
Ribosomal_S23p (db=HMMPfam db_id=PF05635 from=12 to=119 evalue=1.7e-34 interpro_id=IPR008815 interpro_description=23S rRNA-associated protein)
S23 ribosomal protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
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ACD51_10_18
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
15285..17006
|
||
ACD51_10_19
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(17093..17542)
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hypothetical protein
INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED (db=HMMPanther db_id=PTHR11911 from=5 to=148 evalue=1.7e-30)
INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED (db=HMMPanther db_id=PTHR11911:SF5 from=5 to=148 evalue=1.7e-30)
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ACD51_10_20
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(17581..18777)
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peptidoglycan glycosyltransferase (EC:2.4.1.129)
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=2 to=393 evalue=1.6e-88 interpro_id=IPR012338 interpro_description=Beta-lactamase-type transpeptidase fold)
no description (db=Gene3D db_id=G3DSA:3.40.710.10 from=1 to=388 evalue=1.6e-84)
Transpeptidase (db=HMMPfam db_id=PF00905 from=20 to=384 evalue=9.1e-72 interpro_id=IPR001460 interpro_description=Penicillin-binding protein, transpeptidase GO=Molecular Function: penicillin binding (GO:0008658), Biological Process: peptidoglycan-based cell wall biogenesis (GO:0009273))
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ACD51_10_21
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(18945..19844)
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Penicillin-binding protein, transpeptidase protein
seg (db=Seg db_id=seg from=96 to=117)
seg (db=Seg db_id=seg from=278 to=290)
coiled-coil (db=Coil db_id=coil from=97 to=118 evalue=NA)
|
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ACD51_10_22
uncultured bacterium, Bacteria
|
Not on your lists |
20057..22438
|
seg (db=Seg db_id=seg from=127 to=147)
Cysteine proteinases (db=superfamily db_id=SSF54001 from=439 to=696 evalue=2.7e-06)
Peptidase_C2 (db=HMMPfam db_id=PF00648 from=442 to=507 evalue=0.00017 interpro_id=IPR001300 interpro_description=Peptidase C2, calpain, catalytic domain GO=Molecular Function: calcium-dependent cysteine-type endopeptidase activity (GO:0004198), Cellular Component: intracellular (GO:0005622), Biological Process: proteolysis (GO:0006508))
CALPAIN_CAT (db=ProfileScan db_id=PS50203 from=442 to=579 evalue=10.304 interpro_id=IPR001300 interpro_description=Peptidase C2, calpain, catalytic domain GO=Molecular Function: calcium-dependent cysteine-type endopeptidase activity (GO:0004198), Cellular Component: intracellular (GO:0005622), Biological Process: proteolysis (GO:0006508))
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ACD51_10_23
uncultured bacterium, Bacteria
|
Not on your lists |
22473..22778
|
coiled-coil (db=Coil db_id=coil from=71 to=92 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD63776.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD51_10_24
uncultured bacterium, Bacteria
|
Not on your lists |
22780..25062
|
seg (db=Seg db_id=seg from=308 to=347)
seg (db=Seg db_id=seg from=286 to=304)
seg (db=Seg db_id=seg from=259 to=280)
seg (db=Seg db_id=seg from=138 to=154)
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ACD51_10_25
uncultured bacterium, Bacteria
|
Not on your lists |
25136..25321
|
processing protease
Peptidase_M16 (db=HMMPfam db_id=PF00675 from=12 to=60 evalue=2.2e-14 interpro_id=IPR011765 interpro_description=Peptidase M16, N-terminal GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
no description (db=Gene3D db_id=G3DSA:3.30.830.10 from=2 to=61 evalue=2.0e-13 interpro_id=IPR011237 interpro_description=Peptidase M16, core GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: metal ion binding (GO:0046872))
LuxS/MPP-like metallohydrolase (db=superfamily db_id=SSF63411 from=2 to=59 evalue=4.2e-11 interpro_id=IPR011249 interpro_description=Metalloenzyme, LuxS/M16 peptidase-like, metal-binding GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: metal ion binding (GO:0046872))
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