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ACD51_17

Alias: ACD51_1278.49314.10

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD51_17_1

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comp(3..1022)
DNA (1020bp) protein (340aa)
DNA ligase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=DNLJ_CARHZ (db=UNIREF evalue=5.0e-96 bit_score=354.0 identity=49.86 coverage=99.7058823529412)
ligA; NAD-dependent DNA ligase (EC:6.5.1.2)
ligA; NAD-dependent DNA ligase (EC:6.5.1.2)
coiled-coil (db=Coil db_id=coil from=3 to=24 evalue=NA)
ACD51_17_2
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

1086..1502
DNA (417bp) protein (139aa)
seg (db=Seg db_id=seg from=72 to=87)
seg 72..87 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_17_3
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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1511..3085
DNA (1575bp) protein (525aa)
metalloendopeptidase-like membrane protein
seg (db=Seg db_id=seg from=16 to=45)
coiled-coil (db=Coil db_id=coil from=184 to=212 evalue=NA)
Duplicated hybrid motif (db=superfamily db_id=SSF51261 from=406 to=522 evalue=3.3e-50 interpro_id=IPR011055 interpro_description=Duplicated hybrid motif)
ACD51_17_4

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3098..4840
DNA (1743bp) protein (581aa)
seg (db=Seg db_id=seg from=564 to=580)
seg (db=Seg db_id=seg from=312 to=324)
seg (db=Seg db_id=seg from=295 to=307)
seg (db=Seg db_id=seg from=7 to=28)
ACD51_17_5
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

4882..5295
DNA (414bp) protein (138aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=64 to=96 evalue=NA)
coiled-coil (db=Coil db_id=coil from=100 to=135 evalue=NA)
seg (db=Seg db_id=seg from=2 to=20)
ACD51_17_6
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(5305..6123)
DNA (819bp) protein (273aa)
seg (db=Seg db_id=seg from=222 to=236)
seg 222..236 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_17_7

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comp(6278..7138)
DNA (861bp) protein (287aa)
sortase family protein
sortase family protein n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI000174396F (db=UNIREF evalue=4.0e-17 bit_score=92.0 identity=35.1 coverage=49.8257839721254)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
seg (db=Seg db_id=seg from=96 to=108)
ACD51_17_8
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(7219..8262)
DNA (1044bp) protein (348aa)
tRNA-specific 2-thiouridylase mnmA n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU94_9FIRM (db=UNIREF evalue=6.0e-79 bit_score=297.0 identity=44.44 coverage=97.7011494252874)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA_Me_trans (db=HMMPfam db_id=PF03054 from=3 to=343 evalue=1.4e-112)
trmU: tRNA (5-methylaminomethyl-2-thiouridyl (db=HMMTigr db_id=TIGR00420 from=2 to=344 evalue=1.7e-112 interpro_id=IPR004506 interpro_description=tRNA-specific 2-thiouridylase GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA processing (GO:0008033), Molecular Function: transferase activity (GO:0016740))
ACD51_17_9
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

8320..10365
DNA (2046bp) protein (682aa)
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Bacillus tusciae DSM 2912 RepID=D5WWN2_9BACL (db=UNIREF evalue=2.0e-132 bit_score=476.0 identity=37.71 coverage=98.9736070381232)
relA; GTP pyrophosphokinase (EC:2.7.6.5)
relA; GTP pyrophosphokinase (EC:2.7.6.5)
spoT_relA: RelA/SpoT family protein (db=HMMTigr db_id=TIGR00691 from=25 to=679 evalue=3.3e-174 interpro_id=IPR004811 interpro_description=RelA/SpoT protein GO=Biological Process: guanosine tetraphosphate metabolic process (GO:0015969))
ACD51_17_10
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(10343..10687)
DNA (345bp) protein (115aa)
TrpR protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9F4_9BACT (db=UNIREF evalue=1.0e-17 bit_score=92.0 identity=48.91 coverage=78.2608695652174)
TrpR family protein
yecD_yerC: TrpR homolog YerC/YecD (db=HMMTigr db_id=TIGR02531 from=25 to=111 evalue=1.4e-27 interpro_id=IPR013368 interpro_description=TrpR homologue YerC/YecD)
Trp_repressor (db=HMMPfam db_id=PF01371 from=27 to=111 evalue=2.4e-25 interpro_id=IPR000831 interpro_description=Trp repressor GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD51_17_11
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(10662..11234)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AJF3_9PORP (db=UNIREF evalue=7.0e-60 bit_score=233.0 identity=54.74 coverage=98.9528795811518)
Phosphoribosyl-ATP pyrophosphatase
HISTIDINOL DEHYDROGENASE (HDH) (db=HMMPanther db_id=PTHR21256 from=8 to=188 evalue=8.6e-58)
histidine_hisI: phosphoribosyl-ATP dip (db=HMMTigr db_id=TIGR03188 from=102 to=185 evalue=9.0e-44 interpro_id=IPR008179 interpro_description=Phosphoribosyl-ATP pyrophosphohydrolase GO=Biological Process: histidine biosynthetic process (GO:0000105), Molecular Function: phosphoribosyl-ATP diphosphatase activity (GO:0004636))
ACD51_17_12
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(11252..12724)
DNA (1473bp) protein (491aa)
hisF; imidazole glycerol phosphate synthase subunit HisF
seg (db=Seg db_id=seg from=7 to=15)
hisF: imidazoleglycerol phosphate synthase, (db=HMMTigr db_id=TIGR00735 from=240 to=489 evalue=6.2e-128 interpro_id=IPR004651 interpro_description=Histidine biosynthesis, HisF GO=Biological Process: histidine biosynthetic process (GO:0000105), Molecular Function: imidazoleglycerol-phosphate synthase activity (GO:0000107), Cellular Component: cytoplasm (GO:0005737))
TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosp (db=HMMTigr db_id=TIGR00007 from=8 to=237 evalue=6.0e-107 interpro_id=IPR006063 interpro_description=Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO=Biological Process: histidine biosynthetic process (GO:0000105), Molecular Function: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity (GO:0003949))
ACD51_17_13
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(12726..13310)
DNA (585bp) protein (195aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase, glutamine amidotransferase HisH subunit (db=HMMPIR db_id=PIRSF000495 from=1 to=193 evalue=6.3e-86 interpro_id=IPR016226 interpro_description=Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit H GO=Biological Process: histidine biosynthetic process (GO:0000105), Cellular Component: cytoplasm (GO:0005737), Molecular Function: transferase activity (GO:0016740))
IMP_synth_hisH: imidazole glycerol pho (db=HMMTigr db_id=TIGR01855 from=2 to=194 evalue=1.1e-73 interpro_id=IPR010139 interpro_description=Imidazole glycerol phosphate synthase, subunit H GO=Biological Process: histidine biosynthetic process (GO:0000105), Cellular Component: cytoplasm (GO:0005737), Molecular Function: transferase activity, transferring pentosyl groups (GO:0016763))
no description (db=Gene3D db_id=G3DSA:3.40.50.880 from=2 to=193 evalue=7.6e-63)
ACD51_17_14
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists


comp(13307..13897)
DNA (591bp) protein (197aa)
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
IGP_DEHYDRATASE_1 (db=PatternScan db_id=PS00954 from=63 to=76 evalue=0.0 interpro_id=IPR020565 interpro_description=Imidazoleglycerol-phosphate dehydratase, conserved site GO=Biological Process: histidine biosynthetic process (GO:0000105), Molecular Function: imidazoleglycerol-phosphate dehydratase activity (GO:0004424))
IGP_DEHYDRATASE_2 (db=PatternScan db_id=PS00955 from=157 to=169 evalue=0.0 interpro_id=IPR020565 interpro_description=Imidazoleglycerol-phosphate dehydratase, conserved site GO=Biological Process: histidine biosynthetic process (GO:0000105), Molecular Function: imidazoleglycerol-phosphate dehydratase activity (GO:0004424))
IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE HIS7 (db=HMMPanther db_id=PTHR23133 from=2 to=196 evalue=8.9e-110)
ACD51_17_15

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comp(13894..15438)
DNA (1545bp) protein (515aa)
histidinol phosphate aminotransferase (EC:2.6.1.9)
AA_TRANSFER_CLASS_2 (db=PatternScan db_id=PS00599 from=212 to=221 evalue=0.0 interpro_id=IPR001917 interpro_description=Aminotransferase, class-II, pyridoxal-phosphate binding site GO=Biological Process: metabolic process (GO:0008152), Molecular Function: transferase activity (GO:0016740))
SUBGROUP I AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751 from=38 to=347 evalue=2.1e-76)
HISTIDINOL-PHOSPHATE AMINOTRANSFERASE (db=HMMPanther db_id=PTHR11751:SF3 from=38 to=347 evalue=2.1e-76)
ACD51_17_16
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(15435..16715)
DNA (1281bp) protein (427aa)
Histidinol dehydrogenase n=13 Tax=Bacteroides RepID=HISX_BACTN (db=UNIREF evalue=9.0e-133 bit_score=477.0 identity=57.38 coverage=96.0187353629977)
hisD; histidinol dehydrogenase
hisD; histidinol dehydrogenase
HISOL_DEHYDROGENASE (db=PatternScan db_id=PS00611 from=225 to=257 evalue=0.0 interpro_id=IPR001692 interpro_description=Histidinol dehydrogenase, conserved site GO=Biological Process: histidine biosynthetic process (GO:0000105), Molecular Function: histidinol dehydrogenase activity (GO:0004399))
ACD51_17_17

Not on your lists

comp(16721..17308)
DNA (588bp) protein (196aa)
ATP phosphoribosyltransferase
ATP phosphoribosyltransferase n=2 Tax=Sphingobacterium spiritivorum RepID=C2G3C9_9SPHI (db=UNIREF evalue=3.0e-45 bit_score=184.0 identity=53.57 coverage=98.9795918367347)
ATP_P_PHORIBOSYLTR (db=PatternScan db_id=PS01316 from=144 to=165 evalue=0.0 interpro_id=IPR018198 interpro_description=ATP phosphoribosyltransferase, conserved site)
hisG: ATP phosphoribosyltransferase (db=HMMTigr db_id=TIGR00070 from=4 to=185 evalue=3.8e-87 interpro_id=IPR013820 interpro_description=ATP phosphoribosyltransferase, catalytic domain GO=Biological Process: histidine biosynthetic process (GO:0000105), Molecular Function: ATP phosphoribosyltransferase activity (GO:0003879), Cellular Component: cytoplasm (GO:0005737))
ACD51_17_18
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists


comp(17295..18590)
DNA (1296bp) protein (432aa)
histidyl-tRNA synthetase
histidyl-tRNA synthetase
Histidyl-tRNA synthetase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7T1_SPHTD (db=UNIREF evalue=5.0e-88 bit_score=328.0 identity=37.53 coverage=96.2962962962963)
Histidyl-tRNA synthetase (db=HMMPIR db_id=PIRSF001549 from=5 to=428 evalue=7.6e-139 interpro_id=IPR004516 interpro_description=Histidyl-tRNA synthetase, class IIa GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
ACD51_17_19
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(18812..19525)
DNA (714bp) protein (238aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] (EC:5.3.1.16)
His_biosynth (db=HMMPfam db_id=PF00977 from=2 to=228 evalue=1.3e-46 interpro_id=IPR006062 interpro_description=Histidine biosynthesis GO=Biological Process: histidine biosynthetic process (GO:0000105))
Ribulose-phoshate binding barrel (db=superfamily db_id=SSF51366 from=1 to=235 evalue=3.6e-45 interpro_id=IPR011060 interpro_description=Ribulose-phosphate binding barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
no description (db=Gene3D db_id=G3DSA:3.20.20.70 from=1 to=237 evalue=1.1e-42 interpro_id=IPR013785 interpro_description=Aldolase-type TIM barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
ACD51_17_20

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comp(19631..20101)
DNA (471bp) protein (157aa)
seg (db=Seg db_id=seg from=34 to=49)
seg (db=Seg db_id=seg from=2 to=15)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD64294.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_17_21
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(20447..21541)
DNA (1095bp) protein (365aa)
GTP-binding protein
GTP-binding protein
GTP-binding protein, HSR1-related n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IN2_THICR (db=UNIREF evalue=1.0e-108 bit_score=397.0 identity=58.13 coverage=98.9041095890411)
seg (db=Seg db_id=seg from=211 to=231)
ACD51_17_22

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comp(21543..22208)
DNA (666bp) protein (222aa)
Putative 3-dehydroquinate dehydratase/shikimate dehydrogenase n=1 Tax=Fagus sylvatica RepID=Q30D00_FAGSY (db=UNIREF evalue=9.0e-28 bit_score=126.0 identity=31.11 coverage=98.6486486486486)
3-dehydroquinate dehydratase
seg (db=Seg db_id=seg from=42 to=51)
DHquinase_I (db=HMMPfam db_id=PF01487 from=5 to=219 evalue=4.2e-50 interpro_id=IPR001381 interpro_description=Dehydroquinase class I GO=Molecular Function: 3-dehydroquinate dehydratase activity (GO:0003855))
ACD51_17_23
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

22225..22902
DNA (678bp) protein (226aa)
putative FMN reductase (EC:1.5.1.29)
Ferredoxin reductase-like, C-terminal NADP-linked domain (db=superfamily db_id=SSF52343 from=89 to=223 evalue=8.9e-34)
no description (db=Gene3D db_id=G3DSA:3.40.50.80 from=98 to=225 evalue=2.0e-25)
Riboflavin synthase domain-like (db=superfamily db_id=SSF63380 from=1 to=102 evalue=4.2e-24 interpro_id=IPR017938 interpro_description=Riboflavin synthase-like beta-barrel)
ACD51_17_24
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

22999..23928
DNA (930bp) protein (310aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=6.0)
transmembrane_regions 5..24 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_17_25
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(23933..27400)
DNA (3468bp) protein (1156aa)
seg (db=Seg db_id=seg from=120 to=131)
seg 120..131 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_17_26

Not on your lists

27537..28151
DNA (615bp) protein (205aa)
seg (db=Seg db_id=seg from=20 to=30)
Uncharacterized protein {ECO:0000313|EMBL:EKD64300.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_17_27

Not on your lists

comp(28166..29110)
DNA (945bp) protein (315aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=291 to=313)
transmembrane_regions (db=TMHMM db_id=tmhmm from=259 to=281)
ACD51_17_28

Not on your lists

comp(29071..29376)
DNA (306bp) protein (102aa)
arsR3; arsenical resistance operon repressor
no description (db=HMMSmart db_id=SM00418 from=6 to=84 evalue=8.0e-24 interpro_id=IPR001845 interpro_description=HTH transcriptional regulator, ArsR GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=87 evalue=7.7e-23)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=4 to=94 evalue=1.3e-20 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ACD51_17_29

Not on your lists

29500..30141
DNA (642bp) protein (214aa)
rubrerythrin
no description (db=Gene3D db_id=G3DSA:1.20.1260.10 from=36 to=168 evalue=5.3e-40 interpro_id=IPR012347 interpro_description=Ferritin-related)
Ferritin-like (db=superfamily db_id=SSF47240 from=38 to=170 evalue=5.2e-34 interpro_id=IPR009078 interpro_description=Ferritin/ribonucleotide reductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: transition metal ion binding (GO:0046914), Biological Process: oxidation reduction (GO:0055114))
Rubrerythrin (db=HMMPfam db_id=PF02915 from=48 to=161 evalue=1.2e-21 interpro_id=IPR003251 interpro_description=Rubrerythrin GO=Molecular Function: metal ion binding (GO:0046872))
ACD51_17_30

Not on your lists

comp(30135..30575)
DNA (441bp) protein (147aa)
seg (db=Seg db_id=seg from=61 to=72)
Uncharacterized protein {ECO:0000313|EMBL:EKD64304.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 50 in total

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