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ACD51_41

Alias: ACD51_17940.22429.10

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD51_41_1

Not on your lists

comp(3..302)
DNA (300bp) protein (100aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD64163.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_41_2

Not on your lists


comp(328..2994)
DNA (2667bp) protein (889aa)
DNA gyrase subunit A n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017435BD (db=UNIREF evalue=0.0 bit_score=930.0 identity=55.27 coverage=90.4386951631046)
DNA gyrase subunit A
DNA gyrase subunit A
seg (db=Seg db_id=seg from=870 to=882)
ACD51_41_3
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

3132..4556
DNA (1425bp) protein (475aa)
diguanylate cyclase/phosphodiesterase
Nucleotide cyclase (db=superfamily db_id=SSF55073 from=266 to=406 evalue=6.6e-36 interpro_id=IPR001054 interpro_description=Adenylyl cyclase class-3/4/guanylyl cyclase GO=Biological Process: cyclic nucleotide biosynthetic process (GO:0009190), Molecular Function: phosphorus-oxygen lyase activity (GO:0016849), Biological Process: intracellular signaling pathway (GO:0023034))
no description (db=Gene3D db_id=G3DSA:3.30.70.270 from=266 to=411 evalue=1.6e-29)
GGDEF (db=HMMPfam db_id=PF00990 from=265 to=398 evalue=1.0e-27 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted)
ACD51_41_4

Not on your lists

7088..7495
DNA (408bp) protein (136aa)
SprT-like (db=HMMPfam db_id=PF10263 from=7 to=98 evalue=5.6e-07 interpro_id=IPR006640 interpro_description=Protein of unknown function SprT)
Uncharacterized protein {ECO:0000313|EMBL:EKD64159.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD51_41_5
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

7583..7990
DNA (408bp) protein (136aa)
seg (db=Seg db_id=seg from=31 to=43)
seg 31..43 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_41_6
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(7987..9702)
DNA (1716bp) protein (572aa)
peptidase (EC:3.4.21.-)
seg (db=Seg db_id=seg from=541 to=561)
seg (db=Seg db_id=seg from=4 to=20)
prc: C-terminal processing peptidase (db=HMMTigr db_id=TIGR00225 from=233 to=571 evalue=4.0e-77 interpro_id=IPR004447 interpro_description=Peptidase S41A, C-terminal peptidase GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type peptidase activity (GO:0008236))
ACD51_41_7
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

9827..12097
DNA (2271bp) protein (757aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=22 to=37)
seg (db=Seg db_id=seg from=319 to=335)
seg (db=Seg db_id=seg from=412 to=425)
ACD51_41_8
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists


12186..13118
DNA (933bp) protein (311aa)
DNA gyrase subunit B (EC:5.99.1.3)
seg (db=Seg db_id=seg from=291 to=306)
seg (db=Seg db_id=seg from=106 to=129)
DNA GYRASE SUBUNIT B (db=HMMPanther db_id=PTHR10169:SF3 from=30 to=290 evalue=1.4e-130)
ACD51_41_9
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists


13193..14143
DNA (951bp) protein (317aa)
DNA gyrase subunit B
DNA gyrase subunit B
DNA gyrase subunit B n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDG8_THET1 (db=UNIREF evalue=7.0e-112 bit_score=407.0 identity=64.04 coverage=99.3690851735016)
seg (db=Seg db_id=seg from=58 to=71)
split with adjacent Jill Banfield (11/15/12)
ACD51_41_10
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

14260..14676
DNA (417bp) protein (139aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions 7..29 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_41_11
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

14790..17360
DNA (2571bp) protein (857aa)
seg (db=Seg db_id=seg from=181 to=195)
seg (db=Seg db_id=seg from=370 to=392)
seg (db=Seg db_id=seg from=597 to=607)
seg (db=Seg db_id=seg from=636 to=648)
ACD51_41_12
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

17386..17592
DNA (207bp) protein (69aa)
seg (db=Seg db_id=seg from=31 to=49)
seg 31..49 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_41_13

Not on your lists

comp(17601..18803)
DNA (1203bp) protein (401aa)
coiled-coil (db=Coil db_id=coil from=84 to=105 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD64158.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_41_14
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

19023..19259
DNA (237bp) protein (79aa)
19023..19259 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_41_15
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

19338..19550
DNA (213bp) protein (71aa)
seg (db=Seg db_id=seg from=57 to=68)
seg 57..68 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_41_16
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

19590..20435
DNA (846bp) protein (282aa)
protoporphyrinogen oxidase
seg (db=Seg db_id=seg from=5 to=22)
RF_mod_PrmC: protein-(glutamine-N5) methy (db=HMMTigr db_id=TIGR03534 from=18 to=274 evalue=1.8e-81 interpro_id=IPR019874 interpro_description=Protein-(glutamine-N5) methyltransferase, release factor-specific)
hemK_fam: methyltransferase, HemK family (db=HMMTigr db_id=TIGR00536 from=1 to=281 evalue=3.7e-52 interpro_id=IPR004556 interpro_description=Modification methylase HemK GO=Biological Process: protein amino acid methylation (GO:0006479), Molecular Function: protein methyltransferase activity (GO:0008276))
ACD51_41_17
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

20517..21596
DNA (1080bp) protein (360aa)
Peptide chain release factor 1 n=2 Tax=Clostridia RepID=RF1_ANATD (db=UNIREF evalue=4.0e-109 bit_score=398.0 identity=54.29 coverage=96.6666666666667)
peptide chain release factor 1
peptide chain release factor 1
coiled-coil (db=Coil db_id=coil from=3 to=24 evalue=NA)
ACD51_41_18
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(21643..22467)
DNA (825bp) protein (275aa)
L-aspartate oxidase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IKZ2_9CLOT (db=UNIREF evalue=5.0e-71 bit_score=271.0 identity=48.0 coverage=98.9090909090909)
L-aspartate oxidase
SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT (db=HMMPanther db_id=PTHR11632 from=3 to=269 evalue=1.1e-115)
L-ASPARTATE OXIDASE (db=HMMPanther db_id=PTHR11632:SF6 from=3 to=269 evalue=1.1e-115)
Displaying 18 items

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