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ACD51_62

Alias: ACD51_19512.20234.10

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD51_62_1
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

474..1097
DNA (624bp) protein (208aa)
phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
PurN: phosphoribosylglycinamide formyltransf (db=HMMTigr db_id=TIGR00639 from=5 to=199 evalue=1.8e-65 interpro_id=IPR004607 interpro_description=Phosphoribosylglycinamide formyltransferase GO=Molecular Function: phosphoribosylglycinamide formyltransferase activity (GO:0004644), Biological Process: 'de novo' IMP biosynthetic process (GO:0006189))
Formyltransferase (db=superfamily db_id=SSF53328 from=5 to=202 evalue=3.6e-57 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
no description (db=Gene3D db_id=G3DSA:3.40.50.170 from=5 to=195 evalue=2.4e-54 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
ACD51_62_2
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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1163..1384
DNA (222bp) protein (74aa)
4fe-4S ferredoxin IroN-sulfur binding domaiN-containing protein
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=13 to=24 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4Fe-4S ferredoxins (db=superfamily db_id=SSF54862 from=3 to=72 evalue=1.1e-13)
no description (db=Gene3D db_id=G3DSA:3.30.70.20 from=6 to=70 evalue=3.9e-10)
ACD51_62_3

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1470..3155
DNA (1686bp) protein (562aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
2-oxoacid oxidoreductase, gamma-alpha subunit n=1 Tax=Deferribacter desulfuricans SSM1 RepID=D3PCG0_DEFDS (db=UNIREF evalue=1.0e-121 bit_score=441.0 identity=41.31 coverage=98.220640569395)
OAFO_sf: 2-oxoacid:acceptor oxidoreductase, (db=HMMTigr db_id=TIGR03710 from=2 to=558 evalue=1.0e-253 interpro_id=IPR022367 interpro_description=2-oxoacid:acceptor oxidoreductase, alpha subunit)
ACD51_62_4
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

3784..4041
DNA (258bp) protein (86aa)
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta (EC:1.2.7.3)
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NKQ4_9DELT (db=UNIREF evalue=6.0e-15 bit_score=83.2 identity=38.1 coverage=96.5116279069768)
PFO_beta_C (db=HMMPfam db_id=PF12367 from=2 to=66 evalue=6.4e-24)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_62_5
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(4045..5076)
DNA (1032bp) protein (344aa)
seg (db=Seg db_id=seg from=185 to=194)
seg (db=Seg db_id=seg from=5 to=18)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=6.0)
seg 5..18 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_62_6
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(5154..5948)
DNA (795bp) protein (265aa)
glycosyl transferase family protein
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=264 evalue=2.9e-54)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=3 to=249 evalue=1.3e-36)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=6 to=145 evalue=1.5e-26 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD51_62_7

Not on your lists

comp(5945..7237)
DNA (1293bp) protein (431aa)
sugar phosphate nucleotydyl transferase (EC:2.7.7.-)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=313 evalue=3.2e-40)
no description (db=Gene3D db_id=G3DSA:2.160.10.10 from=236 to=426 evalue=3.9e-30)
GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE (db=HMMPanther db_id=PTHR22572:SF18 from=9 to=388 evalue=7.8e-29)
ACD51_62_8
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

7332..8600
DNA (1269bp) protein (423aa)
7332..8600 + (rbs_motif=TAA rbs_spacer=3bp)
hypothetical protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_62_9
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

8684..9286
DNA (603bp) protein (201aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=5.0)
PROKAR_LIPOPROTEIN Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_62_10
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

13621..13935
DNA (315bp) protein (105aa)
coiled-coil (db=Coil db_id=coil from=71 to=92 evalue=NA)
coiled-coil 71..92 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_62_11
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

13987..14361
DNA (375bp) protein (125aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=18 evalue=6.0)
PROKAR_LIPOPROTEIN Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_62_12
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(14369..15556)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos27E6 RepID=Q64BC7_9ARCH (db=UNIREF evalue=2.0e-101 bit_score=373.0 identity=51.33 coverage=89.6464646464647)
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
seg (db=Seg db_id=seg from=377 to=394)
ACD51_62_13
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(15642..16661)
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Thermococcus barophilus MP RepID=B5IWD3_9EURY (db=UNIREF evalue=2.0e-103 bit_score=379.0 identity=55.46 coverage=97.0588235294118)
phosphoribosylaminoimidazolecarboxamide formyltransferase
phosphoribosylaminoimidazolecarboxamide formyltransferase
DUF1297 (db=HMMPfam db_id=PF06973 from=170 to=338 evalue=1.8e-68 interpro_id=IPR009720 interpro_description=IMP biosynthesis enzyme PurP, C-terminal GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: ATP binding (GO:0005524), Biological Process: IMP biosynthetic process (GO:0006188), Molecular Function: ligase activity, forming carbon-nitrogen bonds (GO:0016879))
ACD51_62_14
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(16741..17625)
DNA (885bp) protein (295aa)
HtpX-2 peptidase
seg (db=Seg db_id=seg from=16 to=49)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
transmembrane_regions (db=TMHMM db_id=tmhmm from=191 to=213)
ACD51_62_15
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(17660..18229)
DNA (570bp) protein (190aa)
membrane protein
LemA-like protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B255F (db=UNIREF evalue=8.0e-49 bit_score=196.0 identity=66.9 coverage=73.6842105263158)
seg (db=Seg db_id=seg from=163 to=180)
seg (db=Seg db_id=seg from=6 to=20)
ACD51_62_16
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(18263..19027)
DNA (765bp) protein (255aa)
UDP pyrophosphate phosphatase
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=243 to=254)
seg (db=Seg db_id=seg from=106 to=115)
ACD51_62_17
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(19162..20271)
DNA (1110bp) protein (370aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
IMP cyclohydrolase;phosphoribosylaminoimidazolecarboxamide formyltransferase n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0L8_HALOH (db=UNIREF evalue=1.0e-89 bit_score=333.0 identity=49.48 coverage=97.2972972972973)
seg (db=Seg db_id=seg from=255 to=266)
Displaying 17 items

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