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ACD51_84

Alias: ACD51_25082.7795.9

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD51_84_1

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comp(3..116)
DNA (114bp) protein (38aa)
3..116 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD63995.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_84_2
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(210..1076)
DNA (867bp) protein (289aa)
tRNA dimethylallyltransferase
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5R1T0_9FIRM (db=UNIREF evalue=1.0e-64 bit_score=250.0 identity=46.42 coverage=97.9238754325259)
seg (db=Seg db_id=seg from=118 to=135)
miaA: tRNA delta(2)-isopentenylpyrophosphate (db=HMMTigr db_id=TIGR00174 from=1 to=284 evalue=1.1e-101 interpro_id=IPR018022 interpro_description=tRNA delta(2)-isopentenylpyrophosphate transferase)
ACD51_84_3
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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1315..1848
DNA (534bp) protein (178aa)
50S ribosomal protein L10
Ribosomal_L10 (db=HMMPfam db_id=PF00466 from=4 to=99 evalue=2.3e-23 interpro_id=IPR001790 interpro_description=Ribosomal protein L10 GO=Cellular Component: intracellular (GO:0005622), Biological Process: ribosome biogenesis (GO:0042254))
Ribosomal_L10 (db=HAMAP db_id=MF_00362 from=3 to=162 evalue=22.072)
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_84_4
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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1888..2295
DNA (408bp) protein (136aa)
rplL; 50S ribosomal protein L7/L12
seg (db=Seg db_id=seg from=44 to=65)
seg (db=Seg db_id=seg from=111 to=130)
L12: ribosomal protein L7/L12 (db=HMMTigr db_id=TIGR00855 from=10 to=135 evalue=9.9e-51 interpro_id=IPR000206 interpro_description=Ribosomal protein L7/L12 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD51_84_5
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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2625..3806
DNA (1182bp) protein (394aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
transmembrane_regions 32..54 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_84_6
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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3828..4403
DNA (576bp) protein (192aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=12 to=26)
seg (db=Seg db_id=seg from=101 to=114)
transmembrane_regions 10..32 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_84_7
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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4404..5699
DNA (1296bp) protein (432aa)
Type II secretion system protein E
Type II secretion system protein E
General secretory pathway protein E n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQ24_9FIRM (db=UNIREF evalue=1.0e-99 bit_score=367.0 identity=51.26 coverage=88.4259259259259)
seg (db=Seg db_id=seg from=158 to=169)
ACD51_84_8

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5985..6980
DNA (996bp) protein (332aa)
type II secretion system protein F
transmembrane_regions (db=TMHMM db_id=tmhmm from=300 to=322)
transmembrane_regions (db=TMHMM db_id=tmhmm from=148 to=165)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=113)
ACD51_84_9

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7360..7833
DNA (474bp) protein (158aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=8 to=27)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=5 to=25 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
Pili subunits (db=superfamily db_id=SSF54523 from=7 to=107 evalue=1.5e-19)
Displaying 9 items

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