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ACD51_100

Alias: ACD51_22779.7295.9

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD51_100_1
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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118..582
DNA (465bp) protein (155aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MI72_RHOM4 (db=UNIREF evalue=1.0e-32 bit_score=142.0 identity=44.3 coverage=94.8387096774194)
rRNA methylase
RNA METHYLTRANSFERASE (db=HMMPanther db_id=PTHR12029 from=12 to=151 evalue=2.2e-39)
gb def: TRNA/rRNA methyltransferase (db=HMMPanther db_id=PTHR12029:SF6 from=12 to=151 evalue=2.2e-39)
ACD51_100_2
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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625..1620
DNA (996bp) protein (332aa)
hypothetical protein
seg (db=Seg db_id=seg from=166 to=176)
seg (db=Seg db_id=seg from=2 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD51_100_3

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1617..2018
DNA (402bp) protein (134aa)
Putative metalloprotease CLOSPI_01856 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3N8_9FIRM (db=UNIREF evalue=1.0e-21 bit_score=105.0 identity=50.0 coverage=74.6268656716418)
yqfG; metal-binding heat shock protein (EC:3.4.24.-)
UPF0054 (db=PatternScan db_id=PS01306 from=105 to=115 evalue=0.0 interpro_id=IPR020549 interpro_description=Uncharacterised protein family UPF0054, conserved site)
TIGR00043: metalloprotein, YbeY/ UPF0054fam (db=HMMTigr db_id=TIGR00043 from=29 to=133 evalue=2.5e-42 interpro_id=IPR002036 interpro_description=Uncharacterised protein family UPF0054 GO=Molecular Function: metallopeptidase activity (GO:0008237), Molecular Function: zinc ion binding (GO:0008270))
ACD51_100_4

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comp(2021..4561)
DNA (2541bp) protein (847aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase
seg (db=Seg db_id=seg from=520 to=530)
UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE (db=HMMPanther db_id=PTHR23135:SF2 from=519 to=846 evalue=1.4e-65)
MUR LIGASE FAMILY MEMBER (db=HMMPanther db_id=PTHR23135 from=519 to=846 evalue=1.4e-65)
ACD51_100_5
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(4637..5335)
DNA (699bp) protein (233aa)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=48 to=225 evalue=1.0e-05)
HD-domain/PDEase-like Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_100_6
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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5400..6020
DNA (621bp) protein (207aa)
SAM-dependent methyltransferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=205 evalue=9.8e-36)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=9 to=186 evalue=4.5e-32)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=46 to=142 evalue=6.4e-25 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
ACD51_100_7
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

6017..7114
DNA (1098bp) protein (366aa)
YibE/F family protein
YibE/F family protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B56B0F (db=UNIREF evalue=6.0e-44 bit_score=181.0 identity=35.43 coverage=91.5300546448087)
seg (db=Seg db_id=seg from=138 to=153)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=23)
Displaying 7 items

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