ggKbase home page

ACD51_122

Alias: ACD51_31246.2816.7

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD51_122_1
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

Not on your lists

142..681
DNA (540bp) protein (180aa)
putative transcriptional regulator
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9G3_9ARCH (db=UNIREF evalue=3.0e-20 bit_score=101.0 identity=35.12 coverage=89.4444444444444)
coiled-coil (db=Coil db_id=coil from=20 to=45 evalue=NA)
Polymerase subunit beta protein {ECO:0000313|EMBL:KKT20060.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;"
ACD51_122_2
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

Not on your lists


737..1147
DNA (411bp) protein (137aa)
50S ribosomal protein L19
50S ribosomal protein L19 n=2 Tax=Clostridiales RepID=D4MWN7_9FIRM (db=UNIREF evalue=1.0e-24 bit_score=115.0 identity=55.86 coverage=79.5620437956204)
seg (db=Seg db_id=seg from=119 to=136)
seg (db=Seg db_id=seg from=82 to=92)
ACD51_122_3
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

1166..1717
DNA (552bp) protein (184aa)
hypothetical protein
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=5 to=181 evalue=5.4e-55 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
RNase_HII (db=HMMPfam db_id=PF01351 from=9 to=182 evalue=8.2e-39 interpro_id=IPR001352 interpro_description=Ribonuclease HII/HIII GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease H activity (GO:0004523))
RIBONUCLEASE HII (db=HMMPanther db_id=PTHR10954 from=1 to=181 evalue=4.4e-37 interpro_id=IPR001352 interpro_description=Ribonuclease HII/HIII GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease H activity (GO:0004523))
ACD51_122_4
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(1707..2621)
DNA (915bp) protein (305aa)
Carbohydrate kinase, PfkB family protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BSA1_9GAMM (db=UNIREF evalue=1.0e-55 bit_score=220.0 identity=39.0 coverage=96.0655737704918)
PfkB domain-containing protein
PFKB_KINASES_1 (db=PatternScan db_id=PS00583 from=50 to=74 evalue=0.0 interpro_id=IPR002173 interpro_description=Carbohydrate/puine kinase, PfkB, conserved site)
Ribokinase-like (db=superfamily db_id=SSF53613 from=1 to=297 evalue=7.7e-50)
ACD51_122_5
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(2578..2850)
DNA (273bp) protein (91aa)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Methanosarcina acetivorans RepID=Q8TNU5_METAC (db=UNIREF evalue=8.0e-14 bit_score=79.3 identity=50.7 coverage=73.6263736263736)
rbfA; glucose-1-phosphate thymidylyltransferase
GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE (db=HMMPanther db_id=PTHR22572:SF13 from=1 to=57 evalue=1.1e-16)
SUGAR-1-PHOSPHATE GUANYL TRANSFERASE (db=HMMPanther db_id=PTHR22572 from=1 to=57 evalue=1.1e-16)
Displaying 5 items

View Taxonomy