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ACD51_153

Alias: ACD51p_60205.12910.6

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD51_153_1
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(3..470)
DNA (468bp) protein (156aa)
Gp20 n=2 Tax=Bacillus phage TP21-L RepID=B8R885_9CAUD (db=UNIREF evalue=1.0e-22 bit_score=108.0 identity=36.94 coverage=97.4358974358974)
spoIVCA; Site-specific recombinase spoIVCA
RECOMBINASES_1 (db=PatternScan db_id=PS00397 from=7 to=15 evalue=0.0 interpro_id=IPR006118 interpro_description=Recombinase, conserved site GO=Molecular Function: recombinase activity (GO:0000150), Biological Process: DNA recombination (GO:0006310))
no description (db=HMMSmart db_id=SM00857 from=4 to=149 evalue=5.6e-50 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
ACD51_153_2
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(467..595)
DNA (129bp) protein (43aa)
467..595 - ( gc_cont=0.287)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD51_153_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(650..904)
DNA (255bp) protein (85aa)
650..904 - ( gc_cont=0.318)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD51_153_4
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(888..1016)
DNA (129bp) protein (43aa)
seg (db=Seg db_id=seg from=32 to=42)
seg 32..42 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD51_153_5
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(1123..1785)
DNA (663bp) protein (221aa)
seg (db=Seg db_id=seg from=193 to=204)
seg (db=Seg db_id=seg from=5 to=15)
seg 193..204 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD51_153_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(1814..2032)
DNA (219bp) protein (73aa)
seg (db=Seg db_id=seg from=20 to=40)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg 20..40 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD51_153_7
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(2039..2920)
DNA (882bp) protein (294aa)
Site-specific recombinase XerD
seg (db=Seg db_id=seg from=205 to=216)
seg (db=Seg db_id=seg from=131 to=148)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=103 to=289 evalue=3.1e-47 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
ACD51_153_8
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(2907..3101)
DNA (195bp) protein (65aa)
Putative DNA-binding domain (db=superfamily db_id=SSF46955 from=4 to=56 evalue=1.6e-08 interpro_id=IPR009061 interpro_description=DNA binding domain, putative GO=Molecular Function: nucleotide binding (GO:0000166))
excise: DNA binding domain, excisionase fami (db=HMMTigr db_id=TIGR01764 from=5 to=55 evalue=4.2e-07 interpro_id=IPR010093 interpro_description=Excisionase/Xis, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
Putative DNA-binding domain 4..56 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD51_153_9
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(3290..3553)
DNA (264bp) protein (88aa)
seg (db=Seg db_id=seg from=28 to=41)
(db=HMMPfam db_id=PF10475 from=8 to=84 evalue=0.00013 interpro_id=IPR019515 interpro_description=Vacuolar protein sorting-associated protein 54)
seg 28..41 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD51_153_10
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(3559..4092)
DNA (534bp) protein (178aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions 21..43 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD51_153_11
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

4402..5013
DNA (612bp) protein (204aa)
Restriction endonuclease BamHI
Restriction endonuclease BamHI n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UFH9_9CYAN (db=UNIREF evalue=9.0e-43 bit_score=176.0 identity=46.08 coverage=96.078431372549)
seg (db=Seg db_id=seg from=49 to=62)
(db=HMMPfam db_id=PF02923 from=1 to=163 evalue=6.4e-48 interpro_id=IPR004194 interpro_description=Restriction endonuclease, type II, BamHI)
ACD51_153_12

Not on your lists

comp(5008..5928)
DNA (921bp) protein (307aa)
DNA modification methylase
DNA modification methylase
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=13 to=254 evalue=7.8e-51)
ACD51_153_13
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(6034..6792)
DNA (759bp) protein (253aa)
TatD-related deoxyribonuclease n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RPJ9_ACCPU (db=UNIREF evalue=1.0e-73 bit_score=279.0 identity=52.26 coverage=95.2569169960474)
TatD-like deoxyribonuclease
TATD_3 (db=PatternScan db_id=PS01091 from=188 to=204 evalue=0.0 interpro_id=IPR018228 interpro_description=Deoxyribonuclease, TatD-related, conserved site GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
Metallo-dependent hydrolases (db=superfamily db_id=SSF51556 from=6 to=252 evalue=2.1e-45)
ACD51_153_14
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(6804..7412)
DNA (609bp) protein (203aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Pseudomonas mendocina NK-01 RepID=F4DYE7_PSEMN (db=UNIREF evalue=2.0e-62 bit_score=241.0 identity=61.58 coverage=98.5221674876847)
seg (db=Seg db_id=seg from=74 to=85)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD51_153_15
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(8212..9084)
DNA (873bp) protein (291aa)
hypothetical protein
seg (db=Seg db_id=seg from=49 to=63)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
hypothetical protein alias=ACD51_C00153G00015,ACD51p_60205.12910.6_15,ACD51p_60205.12910.6G0015 id=74560 tax=ACD51 species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=PER organism_desc=PER
ACD51_153_16
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(9089..10996)
DNA (1908bp) protein (636aa)
KAP P-loop
KAP P-loop
coiled-coil (db=Coil db_id=coil from=429 to=450 evalue=NA)
ACD51_153_17
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(11108..12943)
DNA (1836bp) protein (612aa)
Resolvase domain n=1 Tax=mine drainage metagenome RepID=E6QWS7_9ZZZZ (db=UNIREF evalue=7.0e-72 bit_score=276.0 identity=31.3 coverage=76.4705882352941)
resolvase domain-containing protein
seg (db=Seg db_id=seg from=205 to=220)
coiled-coil (db=Coil db_id=coil from=449 to=470 evalue=NA)
Displaying 17 items

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