ggKbase home page

ACD51_2_9

Organism: PER_ACD51

near complete RP 49 / 55 MC: 15 BSCG 46 / 51 MC: 5 ASCG 0 / 38
Location: 8529..9698

Top 3 Functional Annotations

Value Algorithm Source
rpoD3; RNA polymerase factor sigma-70 RpoD (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 366.0
  • Bit_score: 404
  • Evalue 4.20e-110
seg (db=Seg db_id=seg from=91 to=113) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
SIGMA70_2 (db=PatternScan db_id=PS00716 from=351 to=377 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYC2_FULL_Peregrinibacteria_41_22_curated → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGGCGCGTACCAGGAAATTTATTACGGGTGTTTCGGATGAGAAACTAGCTAAGTTCTCGCCGGAAGTCCGTGCCCTCATTGAGAAGGGTAAGCAGAGAGGTTTCGTTACTCATCAGGAGCTTGTAAAAGCTATTCCGACAGTTGAGGATGATCTCGTTCTTTTGGATGAGATTTATACTCTATTCATGGATCTTGGAGTTGAGGTGATGGACGTGAAAGACGAGATGATATGGGGTGATAATGCGAAAGATGAAGAAGAAGAGGTTCGCCCTGTCGGCGAAGATGGTGATGACGTCTTACCGGATGATGATGAAAAAGAGCCTGAGAAAGGTGTTGAATTGCAAGAGATTGCGAACGATTCGATTAGGATGTATTTGTGTGAAATCGGCAAGGTTAAGCTTCTTACCGCAAAGGATGAGGCTGATTTGGCTCGCAGGATTGCGAAAGGGGATCAATCTGCCAAGAAAGGTCTTGCTGAGGCAAATCTTCGTCTTGTCGTCAGTATTGCGAAAAAATATATCGGTCGAGGACTTTCTTTCTTGGATTTGATTCAAGAAGGCAATATCGGTCTTTTCCGCGCTGTTGAGAAGTTCGATCCGGATAGAGGTTTCAAGTTTTCAACATATGCAACTTGGTGGATTCGTCAGGCTATTACTCGCGCTATTGCCGATCAAGCTAGGACGATTCGTATTCCTGTGCATATGGTCGAGACGATCAATAAGCTTACGCATACTCAGCGAAGGCTTGTGCAAGAGCTTGGTCGTGAACCATTGGTTGAAGAGTTGGCGGCTGAAATGGCGATGGATGTGAAAAAGGTCAGACATGTACTCAAAATTTCTCAAGATATAGTTTCTCTCGAAGCGCCTGTTGGTGCAGAAGAGGATAGTAAATTGGGAGATTTCATTGAGGATGATGATGCATTATCTCCTTCAGAACTTACAAATCGACAGCTTATTCGTGAAAACATTCACGATATGCTTCAGTATTTGTCCCCAAGGGAGCGCAAAATTATTGAAATGAGATTCGGTTTGAAAGATGGAATTGGTCATACTCTTGAAGAGGTTGGCAAGGAGTTCGGTGTTACACGCGAGCGTATTCGTCAAATTGAAGCTAAGGTTCTTCAGAAGCTCCGTGAACATCCAACAAGTGTGAGGATAAAGGATAATTAG
PROTEIN sequence
Length: 390
MARTRKFITGVSDEKLAKFSPEVRALIEKGKQRGFVTHQELVKAIPTVEDDLVLLDEIYTLFMDLGVEVMDVKDEMIWGDNAKDEEEEVRPVGEDGDDVLPDDDEKEPEKGVELQEIANDSIRMYLCEIGKVKLLTAKDEADLARRIAKGDQSAKKGLAEANLRLVVSIAKKYIGRGLSFLDLIQEGNIGLFRAVEKFDPDRGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLTHTQRRLVQELGREPLVEELAAEMAMDVKKVRHVLKISQDIVSLEAPVGAEEDSKLGDFIEDDDALSPSELTNRQLIRENIHDMLQYLSPRERKIIEMRFGLKDGIGHTLEEVGKEFGVTRERIRQIEAKVLQKLREHPTSVRIKDN*