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ACD51_2

Alias: ACD51_87399.48185.11

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD51_2_1

Not on your lists

comp(176..1756)
DNA (1581bp) protein (527aa)
176..1756 - (rbs_motif=TAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD63144.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_2_2
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(1753..2304)
DNA (552bp) protein (184aa)
acetyltransferase
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=177 evalue=4.5e-16 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=5 to=174 evalue=2.3e-05 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
FR47 (db=HMMPfam db_id=PF08445 from=113 to=174 evalue=5.2e-05 interpro_id=IPR013653 interpro_description=FR47-like)
ACD51_2_3

Not on your lists

comp(2308..2850)
DNA (543bp) protein (181aa)
2308..2850 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD63146.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_2_4

Not on your lists

3413..4108
DNA (696bp) protein (232aa)
seg (db=Seg db_id=seg from=165 to=177)
transmembrane_regions (db=TMHMM db_id=tmhmm from=65 to=87)
transmembrane_regions (db=TMHMM db_id=tmhmm from=160 to=177)
transmembrane_regions (db=TMHMM db_id=tmhmm from=187 to=204)
ACD51_2_5

Not on your lists

4141..4626
DNA (486bp) protein (162aa)
tetrapyrrole methyltransferase domain-containing/MazG-like domain-containing protein
MazG (db=HMMPfam db_id=PF03819 from=67 to=137 evalue=9.1e-17 interpro_id=IPR004518 interpro_description=NTP pyrophosphohydrolase MazG, putative catalytic core)
all-alpha NTP pyrophosphatases (db=superfamily db_id=SSF101386 from=38 to=144 evalue=1.5e-14)
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:EKD63131.1}; EC=3.6.1.19 {ECO:0000313|EMBL:EKD63131.1};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacte
ACD51_2_6

Not on your lists

4658..6247
DNA (1590bp) protein (530aa)
Fe-S oxidoreductase
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=171 to=394 evalue=2.5e-21)
RADICAL SAM PROTEINS (db=HMMPanther db_id=PTHR11918 from=99 to=413 evalue=1.9e-19 interpro_id=IPR005839 interpro_description=Methylthiotransferase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: RNA modification (GO:0009451), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
no description (db=HMMSmart db_id=SM00729 from=201 to=432 evalue=1.6e-10 interpro_id=IPR006638 interpro_description=Elongator protein 3/MiaB/NifB)
ACD51_2_7

Not on your lists

6247..6627
DNA (381bp) protein (127aa)
6247..6627 + (rbs_motif=TAA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD63133.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_2_8

Not on your lists

6759..8519
DNA (1761bp) protein (587aa)
hypothetical protein
hypothetical protein
DNA primase n=5 Tax=Dehalococcoides RepID=Q3Z903_DEHE1 (db=UNIREF evalue=6.0e-85 bit_score=318.0 identity=39.95 coverage=72.2316865417376)
coiled-coil (db=Coil db_id=coil from=420 to=448 evalue=NA)
ACD51_2_9
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

8529..9698
DNA (1170bp) protein (390aa)
rpoD3; RNA polymerase factor sigma-70 RpoD (EC:2.7.7.6)
seg (db=Seg db_id=seg from=91 to=113)
SIGMA70_2 (db=PatternScan db_id=PS00716 from=351 to=377 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
SIGMA70_1 (db=PatternScan db_id=PS00715 from=182 to=195 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
ACD51_2_10
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

9753..10271
DNA (519bp) protein (173aa)
transcription elongation factor GreA
seg (db=Seg db_id=seg from=22 to=34)
coiled-coil (db=Coil db_id=coil from=61 to=82 evalue=NA)
coiled-coil (db=Coil db_id=coil from=17 to=45 evalue=NA)
ACD51_2_11

Not on your lists

10411..11004
DNA (594bp) protein (198aa)
10411..11004 + (rbs_motif=TAA rbs_spacer=12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD63137.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_2_12

Not on your lists

comp(11016..11423)
DNA (408bp) protein (136aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=90 to=109)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=45)
seg (db=Seg db_id=seg from=86 to=104)
ACD51_2_13
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(11410..12219)
DNA (810bp) protein (270aa)
prolipoprotein diacylglyceryl transferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=164 to=186)
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=140)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
ACD51_2_14

Not on your lists

comp(12221..13705)
DNA (1485bp) protein (495aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=474 to=493)
transmembrane_regions (db=TMHMM db_id=tmhmm from=447 to=464)
transmembrane_regions (db=TMHMM db_id=tmhmm from=404 to=426)
seg (db=Seg db_id=seg from=407 to=426)
ACD51_2_15

Not on your lists

comp(13709..15340)
DNA (1632bp) protein (544aa)
CTP synthase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDI7_THET1 (db=UNIREF evalue=0.0 bit_score=647.0 identity=59.03 coverage=97.2426470588235)
CTP synthase (EC:6.3.4.2)
CTP synthase (EC:6.3.4.2)
PyrG: CTP synthase (db=HMMTigr db_id=TIGR00337 from=1 to=534 evalue=0.0 interpro_id=IPR004468 interpro_description=CTP synthase GO=Molecular Function: CTP synthase activity (GO:0003883), Biological Process: pyrimidine nucleotide biosynthetic process (GO:0006221))
ACD51_2_16

Not on your lists

comp(15414..16388)
DNA (975bp) protein (325aa)
Tryptophanyl-tRNA synthetase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N354_9BACT (db=UNIREF evalue=6.0e-88 bit_score=327.0 identity=50.0 coverage=97.5384615384615)
tryptophanyl-tRNA synthetase
tryptophanyl-tRNA synthetase
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=11 to=20 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
ACD51_2_17
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(16392..16703)
DNA (312bp) protein (104aa)
seg (db=Seg db_id=seg from=31 to=45)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_2_18

Not on your lists

18522..20735
DNA (2214bp) protein (738aa)
S-layer protein
seg (db=Seg db_id=seg from=573 to=584)
seg (db=Seg db_id=seg from=447 to=466)
seg (db=Seg db_id=seg from=431 to=445)
ACD51_2_19
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(20718..21539)
DNA (822bp) protein (274aa)
seg (db=Seg db_id=seg from=23 to=29)
seg (db=Seg db_id=seg from=242 to=253)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=34 evalue=5.0)
seg 242..253 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_2_20

Not on your lists

comp(21808..24972)
DNA (3165bp) protein (1055aa)
protein translocase subunits SecF/SecD
transmembrane_regions (db=TMHMM db_id=tmhmm from=998 to=1020)
seg (db=Seg db_id=seg from=881 to=899)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACD51_2_21
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(24987..25388)
DNA (402bp) protein (134aa)
cupin
RmlC-like cupins (db=superfamily db_id=SSF51182 from=5 to=114 evalue=4.0e-18 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
MannoseP_isomer (db=HMMPfam db_id=PF01050 from=7 to=109 evalue=1.5e-07 interpro_id=IPR001538 interpro_description=Mannose-6-phosphate isomerase, type II, C-terminal GO=Biological Process: polysaccharide metabolic process (GO:0005976), Molecular Function: nucleotidyltransferase activity (GO:0016779))
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=17 to=97 evalue=2.0e-05 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
ACD51_2_22
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(25523..26578)
DNA (1056bp) protein (352aa)
mannose-1-phosphate guanylyltransferase
seg (db=Seg db_id=seg from=120 to=131)
seg (db=Seg db_id=seg from=84 to=95)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=1 to=348 evalue=8.5e-79)
ACD51_2_23

Not on your lists

comp(26730..27389)
DNA (660bp) protein (220aa)
seg (db=Seg db_id=seg from=106 to=138)
seg (db=Seg db_id=seg from=143 to=175)
seg (db=Seg db_id=seg from=177 to=203)
seg (db=Seg db_id=seg from=74 to=90)
ACD51_2_24
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

27480..30317
DNA (2838bp) protein (946aa)
seg (db=Seg db_id=seg from=416 to=427)
seg (db=Seg db_id=seg from=643 to=656)
seg (db=Seg db_id=seg from=892 to=912)
seg 416..427 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_2_25

Not on your lists

comp(30321..31820)
DNA (1500bp) protein (500aa)
phosphoglycerate mutase (EC:5.4.2.1)
seg (db=Seg db_id=seg from=241 to=255)
Cofactor-independent phosphoglycerate mutase (db=HMMPIR db_id=PIRSF001492 from=1 to=499 evalue=3.2e-206 interpro_id=IPR005995 interpro_description=Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO=Molecular Function: phosphoglycerate mutase activity (GO:0004619), Biological Process: glucose catabolic process (GO:0006007))
pgm_bpd_ind: 2,3-bisphosphoglycerate-inde (db=HMMTigr db_id=TIGR01307 from=5 to=499 evalue=5.8e-192 interpro_id=IPR005995 interpro_description=Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO=Molecular Function: phosphoglycerate mutase activity (GO:0004619), Biological Process: glucose catabolic process (GO:0006007))
ACD51_2_26
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(31821..32570)
DNA (750bp) protein (250aa)
prepilin peptidase-1 (EC:2.1.1.1 3.4.23.43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=185 to=207)
transmembrane_regions (db=TMHMM db_id=tmhmm from=148 to=165)
seg (db=Seg db_id=seg from=194 to=209)
ACD51_2_27
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(32563..33912)
DNA (1350bp) protein (450aa)
hypothetical protein
TPR repeat-containing protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QWK2_CHLT3 (db=UNIREF evalue=3.0e-20 bit_score=103.0 identity=26.46 coverage=92.2222222222222)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=35 to=285 evalue=5.9e-37 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
HCP-like (db=superfamily db_id=SSF81901 from=195 to=429 evalue=1.1e-36)
ACD51_2_28

Not on your lists

comp(34120..34596)
DNA (477bp) protein (159aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
seg (db=Seg db_id=seg from=139 to=148)
RUVC (db=PatternScan db_id=PS01321 from=113 to=148 evalue=0.0 interpro_id=IPR020563 interpro_description=Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site)
RuvC (db=HMMPfam db_id=PF02075 from=7 to=151 evalue=6.6e-46 interpro_id=IPR002176 interpro_description=Crossover junction endodeoxyribonuclease RuvC GO=Molecular Function: endodeoxyribonuclease activity (GO:0004520), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
ACD51_2_29

Not on your lists

comp(34623..36014)
DNA (1392bp) protein (464aa)
pyruvate kinase
pyruvate kinase
Pyruvate kinase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W259_DESAS (db=UNIREF evalue=2.0e-104 bit_score=383.0 identity=44.62 coverage=96.551724137931)
seg (db=Seg db_id=seg from=208 to=220)
ACD51_2_30

Not on your lists

38022..38483
DNA (462bp) protein (154aa)
38022..38483 + (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD63115.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 40 in total

View Taxonomy