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ACD52_15

Alias: ACD52_323241.12309.7

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_15_1

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1..231
DNA (231bp) protein (77aa)
1..231 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD62504.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_15_2

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280..1446
DNA (1167bp) protein (389aa)
hypothetical protein
hypothetical protein
Cell division protein ftsZ n=9 Tax=Thermoanaerobacter RepID=B0K3G4_THEPX (db=UNIREF evalue=3.0e-97 bit_score=358.0 identity=54.83 coverage=89.974293059126)
seg (db=Seg db_id=seg from=103 to=114)
ACD52_15_3

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comp(1443..1538)
DNA (96bp) protein (32aa)
seg (db=Seg db_id=seg from=19 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD62506.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_15_4
R_RIF_OP11_02_39_21, RIF-OP11-2, Microgenomates, Bacteria

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1555..4401
DNA (2847bp) protein (949aa)
hypothetical protein
UPI0001D5BAE9 related cluster n=1 Tax=unknown RepID=UPI0001D5BAE9 (db=UNIREF evalue=0.0 bit_score=645.0 identity=39.98 coverage=92.8345626975764)
seg (db=Seg db_id=seg from=467 to=480)
ACD52_15_5

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4398..5438
DNA (1041bp) protein (347aa)
cell elongation-specific peptidoglycan biosynthesis regulator RodA
Rod shape-determining protein RodA n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMZ7_9FIRM (db=UNIREF evalue=6.0e-50 bit_score=201.0 identity=38.34 coverage=87.8962536023055)
transmembrane_regions (db=TMHMM db_id=tmhmm from=138 to=160)
transmembrane_regions (db=TMHMM db_id=tmhmm from=255 to=272)
ACD52_15_6

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5477..5779
DNA (303bp) protein (101aa)
seg (db=Seg db_id=seg from=73 to=84)
Ribosomal_L21p (db=HMMPfam db_id=PF00829 from=3 to=94 evalue=9.4e-19 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L21p-like (db=superfamily db_id=SSF141091 from=2 to=99 evalue=1.7e-18)
L21: ribosomal protein L21 (db=HMMTigr db_id=TIGR00061 from=3 to=100 evalue=3.5e-10 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD52_15_7

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5853..6104
DNA (252bp) protein (84aa)
50S ribosomal protein L27
Ribosomal_L27 (db=HMMPfam db_id=PF01016 from=3 to=80 evalue=1.4e-25 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMALL27 (db=FPrintScan db_id=PR00063 from=4 to=28 evalue=2.3e-21 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMALL27 (db=FPrintScan db_id=PR00063 from=29 to=53 evalue=2.3e-21 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD52_15_8

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6106..6945
DNA (840bp) protein (280aa)
ParB-like partition protein
parB_part: ParB-like partition proteins (db=HMMTigr db_id=TIGR00180 from=1 to=181 evalue=1.5e-48 interpro_id=IPR004437 interpro_description=ParB-like partition protein GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00470 from=6 to=95 evalue=8.7e-30 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
KorB DNA-binding domain-like (db=superfamily db_id=SSF109709 from=87 to=199 evalue=1.3e-28)
ACD52_15_9

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comp(6915..7508)
DNA (594bp) protein (198aa)
signal peptidase I (EC:3.4.21.89)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=12 to=32)
SPASE_I_3 (db=PatternScan db_id=PS00761 from=137 to=150 evalue=0.0 interpro_id=IPR019758 interpro_description=Peptidase S26A, signal peptidase I, conserved site GO=Molecular Function: serine-type peptidase activity (GO:0008236), Cellular Component: integral to membrane (GO:0016021))
ACD52_15_10

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7764..8414
DNA (651bp) protein (217aa)
ferric reductase domain-containing protein (db=KEGG evalue=2.0e-09 bit_score=65.9 identity=33.1 coverage=58.5253456221198)
transmembrane_regions (db=TMHMM db_id=tmhmm from=187 to=209)
transmembrane_regions (db=TMHMM db_id=tmhmm from=160 to=177)
transmembrane_regions (db=TMHMM db_id=tmhmm from=128 to=147)
ACD52_15_11

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comp(8392..9108)
DNA (717bp) protein (239aa)
CUB protein
Biofilm associated protein A n=1 Tax=Citrobacter sp. 30_2 RepID=C1MAA2_9ENTR (db=UNIREF evalue=5.0e-11 bit_score=71.6 identity=35.15 coverage=61.0878661087866)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
Biofilm associated protein A {ECO:0000313|EMBL:EKD62502.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_15_12

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comp(9203..9934)
DNA (732bp) protein (244aa)
oxidoreductase, 2Fe-2S and FAD/NAD(P) binding domain-containing protein
Ferredoxin reductase-like, C-terminal NADP-linked domain (db=superfamily db_id=SSF52343 from=89 to=238 evalue=5.5e-37)
no description (db=Gene3D db_id=G3DSA:3.40.50.80 from=99 to=240 evalue=1.0e-29)
NAD_binding_1 (db=HMMPfam db_id=PF00175 from=111 to=222 evalue=9.6e-22 interpro_id=IPR001433 interpro_description=Oxidoreductase FAD/NAD(P)-binding GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
Ferredoxin reductase-like, C-terminal NADP-linked domain kelly wrighton (11/15/12)
ACD52_15_13

Not on your lists

10009..10188
DNA (180bp) protein (60aa)
seg (db=Seg db_id=seg from=45 to=59)
Uncharacterized protein {ECO:0000313|EMBL:EKD62495.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_15_14

Not on your lists

10240..10461
DNA (222bp) protein (74aa)
10240..10461 + (rbs_motif=AAT rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD62493.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_15_15

Not on your lists

10491..10754
DNA (264bp) protein (88aa)
10491..10754 + (rbs_motif=AAT rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD62493.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_15_16

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comp(10769..10963)
DNA (195bp) protein (65aa)
Trans_reg_C (db=HMMPfam db_id=PF00486 from=3 to=62 evalue=5.3e-09 interpro_id=IPR001867 interpro_description=Signal transduction response regulator, C-terminal GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=1 to=63 evalue=9.0e-09 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: reg
Uncharacterized protein {ECO:0000313|EMBL:EKD62494.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_15_17
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(10983..11822)
DNA (840bp) protein (280aa)
seg (db=Seg db_id=seg from=89 to=100)
seg (db=Seg db_id=seg from=253 to=263)
C-terminal effector domain of the bipartite response regulators 241..335 Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_15_18

Not on your lists

11886..12281
DNA (396bp) protein (132aa)
11886..12281 + (rbs_motif=TAA rbs_spacer=12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD62492.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 18 items

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