Alias: ACD52_100864.30963.9
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD52_19_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
117..710
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signal peptidase I (EC:3.4.21.89)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=12 to=32)
SPASE_I_3 (db=PatternScan db_id=PS00761 from=137 to=150 evalue=0.0 interpro_id=IPR019758 interpro_description=Peptidase S26A, signal peptidase I, conserved site GO=Molecular Function: serine-type peptidase activity (GO:0008236), Cellular Component: integral to membrane (GO:0016021))
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ACD52_19_2
uncultured bacterium, Bacteria
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Not on your lists |
comp(680..1519)
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chromosome segregation DNA-binding protein
parB_part: ParB-like partition proteins (db=HMMTigr db_id=TIGR00180 from=1 to=181 evalue=9.8e-50 interpro_id=IPR004437 interpro_description=ParB-like partition protein GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00470 from=6 to=95 evalue=9.3e-30 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
KorB DNA-binding domain-like (db=superfamily db_id=SSF109709 from=87 to=199 evalue=8.6e-29)
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ACD52_19_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(1521..1772)
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50S ribosomal protein L27
Ribosomal_L27 (db=HMMPfam db_id=PF01016 from=3 to=80 evalue=7.7e-26 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMALL27 (db=FPrintScan db_id=PR00063 from=29 to=53 evalue=2.0e-22 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMALL27 (db=FPrintScan db_id=PR00063 from=4 to=28 evalue=2.0e-22 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD52_19_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(1838..2140)
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seg (db=Seg db_id=seg from=73 to=84)
L21p-like (db=superfamily db_id=SSF141091 from=2 to=99 evalue=2.9e-17)
Ribosomal_L21p (db=HMMPfam db_id=PF00829 from=3 to=94 evalue=3.4e-17 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L21: ribosomal protein L21 (db=HMMTigr db_id=TIGR00061 from=3 to=100 evalue=1.7e-08 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD52_19_5
uncultured bacterium, Bacteria
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Not on your lists |
comp(2186..3142)
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D-glycero-D-manno-heptose-1-phosphate adenylyltransferase n=1 Tax=Methanococcus voltae RepID=Q2EMT9_METVO (db=UNIREF evalue=1.0e-08 bit_score=64.3 identity=39.02 coverage=25.0783699059561)
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=141 to=278 evalue=3.5e-12)
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=141 to=281 evalue=0.00024 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
D-glycero-D-manno-heptose-1-phosphate adenylyltransferase {ECO:0000313|EMBL:EKD62972.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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EC 2.7.7.70 ?
Jill Banfield
(11/15/12)
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ACD52_19_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(3165..4205)
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cell elongation-specific peptidoglycan biosynthesis regulator roda
Rod shape-determining protein RodA n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMZ7_9FIRM (db=UNIREF evalue=2.0e-47 bit_score=193.0 identity=41.08 coverage=84.149855907781)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=28)
seg (db=Seg db_id=seg from=256 to=266)
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ACD52_19_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(4202..7027)
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hypothetical protein
hypothetical protein
Isoleucyl-tRNA synthetase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9H8_9BACT (db=UNIREF evalue=0.0 bit_score=642.0 identity=39.45 coverage=90.1273885350319)
seg (db=Seg db_id=seg from=173 to=183)
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ACD52_19_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
7090..7371
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seg (db=Seg db_id=seg from=71 to=87)
seg 71..87 Tax=RBG_16_RIF_OP11_02_41_13_curated
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ACD52_19_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(7374..8543)
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hypothetical protein
hypothetical protein
Cell division protein FtsZ n=1 Tax=Bacillus tusciae DSM 2912 RepID=D5WQE0_9BACL (db=UNIREF evalue=2.0e-96 bit_score=356.0 identity=61.42 coverage=81.7948717948718)
seg (db=Seg db_id=seg from=103 to=114)
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ACD52_19_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(8612..9880)
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hypothetical protein
seg (db=Seg db_id=seg from=176 to=190)
seg (db=Seg db_id=seg from=34 to=45)
seg (db=Seg db_id=seg from=57 to=71)
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ACD52_19_11
uncultured bacterium, Bacteria
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Not on your lists |
comp(9890..10561)
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seg (db=Seg db_id=seg from=191 to=203)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD62978.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD52_19_12
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(10558..11655)
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hypothetical protein
Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPX0_9FIRM (db=UNIREF evalue=2.0e-42 bit_score=176.0 identity=32.65 coverage=89.344262295082)
transmembrane_regions (db=TMHMM db_id=tmhmm from=102 to=121)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
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ACD52_19_13
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(11659..12747)
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cell division protein ftsw
transmembrane_regions (db=TMHMM db_id=tmhmm from=16 to=32)
seg (db=Seg db_id=seg from=230 to=244)
seg (db=Seg db_id=seg from=80 to=95)
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ACD52_19_14
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(12751..13806)
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mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
transmembrane_regions (db=TMHMM db_id=tmhmm from=229 to=251)
transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=117)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
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ACD52_19_15
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(13831..14856)
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hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=139 to=306 evalue=2.2e-34 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=147 to=332 evalue=1.1e-31 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
FemAB (db=HMMPfam db_id=PF02388 from=12 to=228 evalue=3.6e-30 interpro_id=IPR003447 interpro_description=Methicillin resistance protein GO=Biological Process: peptidoglycan biosynthetic process (GO:0009252))
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ACD52_19_16
uncultured bacterium, Bacteria
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Not on your lists |
comp(14838..16094)
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degt/dnrj/eryc1/strs aminotransferase
seg (db=Seg db_id=seg from=241 to=256)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=4 to=415 evalue=5.6e-72 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
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ACD52_19_17
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(16087..17658)
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MurF; UDP-N-acetylmuramyl pentapeptide synthase
transmembrane_regions (db=TMHMM db_id=tmhmm from=103 to=125)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=62 to=74)
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ACD52_19_18
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(17646..18347)
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2-hydroxy-6-oxohepta-2,4-dienoatehydrolase
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=3 to=231 evalue=4.4e-33)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=5 to=231 evalue=3.3e-26)
ALPHA/BETA HYDROLASE (db=HMMPanther db_id=PTHR10992:SF20 from=5 to=232 evalue=2.1e-21)
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ACD52_19_19
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(18340..19629)
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biotin carboxylase-like protein (EC:6.4.1.2) (db=KEGG evalue=4.0e-12 bit_score=76.3 identity=21.9 coverage=95.1162790697674)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=113 to=316 evalue=2.1e-14)
ATP_GRASP (db=ProfileScan db_id=PS50975 from=118 to=316 evalue=18.008 interpro_id=IPR011761 interpro_description=ATP-grasp fold GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: ATP binding (GO:0005524))
biotin carboxylase-like protein (EC:6.4.1.2) alias=ACD52_C00019G00019,ACD52_100864.30963.9G0019,ACD52_100864.30963.9_19 id=74786 tax=ACD52 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes organism_group=OP11 organism_desc=OP11
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ACD52_19_20
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
19683..20765
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murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZE42_9BACT (db=UNIREF evalue=2.0e-70 bit_score=270.0 identity=38.33 coverage=93.3518005540166)
murB: UDP-N-acetylenolpyruvoylglucosamine re (db=HMMTigr db_id=TIGR00179 from=9 to=360 evalue=1.2e-55 interpro_id=IPR003170 interpro_description=UDP-N-acetylenolpyruvoylglucosamine reductase GO=Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762), Biological Process: peptidoglycan biosynthetic process (GO:0009252), Biological Process: oxidation reduction (GO:0055114))
FAD-binding domain (db=superfamily db_id=SSF56176 from=7 to=205 evalue=2.4e-37 interpro_id=IPR016166 interpro_description=FAD-binding, type 2 GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: FAD binding (GO:0050660))
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ACD52_19_21
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(20774..21037)
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ACD52_19_22
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(21105..22214)
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hypothetical protein
coiled-coil (db=Coil db_id=coil from=128 to=149 evalue=NA)
coiled-coil (db=Coil db_id=coil from=45 to=105 evalue=NA)
seg (db=Seg db_id=seg from=255 to=265)
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ACD52_19_23
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
22267..23292
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cell envelope-related transcriptional attenuator
seg (db=Seg db_id=seg from=62 to=76)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=28)
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ACD52_19_24
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(23293..23946)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
seg (db=Seg db_id=seg from=19 to=30)
seg (db=Seg db_id=seg from=37 to=57)
transmembrane_regions 33..55 Tax=RBG_16_RIF_OP11_02_41_13_curated
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ACD52_19_25
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
24013..24903
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4-hydroxybenzoate octaprenyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=34)
seg (db=Seg db_id=seg from=205 to=221)
seg (db=Seg db_id=seg from=17 to=30)
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ACD52_19_26
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(24877..25797)
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threonine synthase (EC:4.2.3.1)
seg (db=Seg db_id=seg from=104 to=120)
Tryptophan synthase beta subunit-like PLP-dependent enzymes (db=superfamily db_id=SSF53686 from=20 to=306 evalue=5.2e-42 interpro_id=IPR001926 interpro_description=Pyridoxal phosphate-dependent enzyme, beta subunit GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152), Molecular Function: pyridoxal phosphate binding (GO:0030170))
PALP (db=HMMPfam db_id=PF00291 from=29 to=302 evalue=5.8e-38 interpro_id=IPR001926 interpro_description=Pyridoxal phosphate-dependent enzyme, beta subunit GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152), Molecular Function: pyridoxal phosphate binding (GO:0030170))
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ACD52_19_27
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(25894..26598)
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25894..26598 - (rbs_motif=TAA rbs_spacer=6bp)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
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ACD52_19_28
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(26595..27917)
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UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
UDP-N-ACETYLMURAMATE--L-ALANINE LIGASE (db=HMMPanther db_id=PTHR23135:SF5 from=115 to=343 evalue=2.2e-50)
MUR LIGASE FAMILY MEMBER (db=HMMPanther db_id=PTHR23135 from=115 to=343 evalue=2.2e-50)
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ACD52_19_29
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(27907..28698)
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Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XMA6_9BACT (db=UNIREF evalue=2.0e-28 bit_score=129.0 identity=34.98 coverage=96.5909090909091)
arginine-tRNA-protein transferase domain protein; K00685 arginine-tRNA-protein transferase [EC:2.3.2.8] (db=KEGG evalue=5.0e-21 bit_score=104.0 identity=33.33 coverage=81.8181818181818)
seg (db=Seg db_id=seg from=101 to=118)
seg (db=Seg db_id=seg from=218 to=231)
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ACD52_19_30
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria
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Not on your lists |
comp(28700..29182)
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28700..29182 - (rbs_motif=AAT rbs_spacer=10bp)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
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