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ACD52_47

Alias: ACD52_407879.8359.6

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_47_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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2..1096
DNA (1095bp) protein (365aa)
sipW; type I signal peptidase
transmembrane_regions (db=TMHMM db_id=tmhmm from=186 to=208)
transmembrane_regions (db=TMHMM db_id=tmhmm from=119 to=141)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
ACD52_47_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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1093..2088
DNA (996bp) protein (332aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=12 to=26)
seg (db=Seg db_id=seg from=294 to=311)
ACD52_47_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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2159..2611
DNA (453bp) protein (151aa)
TrpR-like (db=superfamily db_id=SSF48295 from=7 to=90 evalue=1.5e-15 interpro_id=IPR010921 interpro_description=Trp repressor/replication initiator GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
Trp_repressor (db=HMMPfam db_id=PF01371 from=7 to=86 evalue=5.9e-15 interpro_id=IPR000831 interpro_description=Trp repressor GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.1270.10 from=6 to=92 evalue=2.6e-07 interpro_id=IPR000831 interpro_description=Trp repressor GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Q3QF21_9GAMM_Q3QF21; (db=BlastProDom db_id=PD012582 from=23 to=79 evalue=6.0e-05 interpro_id=IPR013335 interpro_description=Trp repressor, bacterial GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription repressor activity (GO:0016564))
ACD52_47_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(2803..3201)
DNA (399bp) protein (133aa)
2803..3201 - (rbs_motif=AAT rbs_spacer=3bp)
seg 70..104 Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_47_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(3719..4300)
DNA (582bp) protein (194aa)
seg (db=Seg db_id=seg from=70 to=104)
seg (db=Seg db_id=seg from=179 to=188)
seg 70..104 Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
ACD52_47_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(4347..4808)
DNA (462bp) protein (154aa)
blue (type 1) copper domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=9 to=39)
ACD52_47_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(4859..5323)
DNA (465bp) protein (155aa)
signal transduction protein
Putative uncharacterized protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KAV7_9GAMM (db=UNIREF evalue=6.0e-18 bit_score=92.8 identity=35.86 coverage=90.9677419354839)
INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED (db=HMMPanther db_id=PTHR11911 from=1 to=141 evalue=6.8e-26)
CBS (db=HMMPfam db_id=PF00571 from=89 to=141 evalue=4.0e-14 interpro_id=IPR000644 interpro_description=Cystathionine beta-synthase, core)
ACD52_47_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(5360..5779)
DNA (420bp) protein (140aa)
atpC; F0F1 ATP synthase subunit epsilon (EC:3.6.3.14)
ATP_synt_epsi: ATP synthase F1, epsilon (db=HMMTigr db_id=TIGR01216 from=3 to=132 evalue=8.6e-23 interpro_id=IPR001469 interpro_description=ATPase, F1 complex, delta/epsilon subunit GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activit
ATP SYNTHASE EPSILON CHAIN (db=HMMPanther db_id=PTHR13822:SF2 from=3 to=132 evalue=1.1e-18)
ATP SYNTHASE DELTA/EPSILON CHAIN (db=HMMPanther db_id=PTHR13822 from=3 to=132 evalue=1.1e-18 interpro_id=IPR001469 interpro_description=ATPase, F1 complex, delta/epsilon subunit GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activity, r
ACD52_47_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(5776..6987)
DNA (1212bp) protein (404aa)
ATP synthase F1 subunit beta
ATP synthase F1 subunit beta
ATP synthase subunit beta n=1 Tax=Bacillus sp. TA2.A1 RepID=Q71CG3_9BACI (db=UNIREF evalue=1.0e-154 bit_score=549.0 identity=69.23 coverage=99.5049504950495)
seg (db=Seg db_id=seg from=86 to=102)
ACD52_47_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(8033..8392)
DNA (360bp) protein (120aa)
ATP synthase F1 subcomplex subunit alpha
seg (db=Seg db_id=seg from=21 to=35)
ATP SYNTHASE (db=HMMPanther db_id=PTHR15184 from=1 to=114 evalue=9.6e-37)
ATP SYNTHASE ALPHA SUBUNIT MITOCHONDRIAL (db=HMMPanther db_id=PTHR15184:SF3 from=1 to=114 evalue=9.6e-37 interpro_id=IPR017458 interpro_description=ATPase, F1 complex, alpha subunit, C-terminal GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting AT
Displaying 10 items

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