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ACD52_54

Alias: ACD52_7660.6185.8

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_54_1

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3..263
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=3 Tax=Eubacterium siraeum RepID=B0MKL2_9FIRM (db=UNIREF evalue=2.0e-22 bit_score=107.0 identity=58.97 coverage=88.5057471264368)
conserved hypothetical protein YmdA/YtgF
Uncharacterized protein {ECO:0000313|EMBL:EKD62122.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_54_2

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319..597
DNA (279bp) protein (93aa)
histone family protein DNA-binding protein
no description (db=HMMSmart db_id=SM00411 from=1 to=91 evalue=1.1e-22 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
IHF-like DNA-binding proteins (db=superfamily db_id=SSF47729 from=1 to=91 evalue=3.1e-22 interpro_id=IPR010992 interpro_description=IHF-like DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
Bac_DNA_binding (db=HMMPfam db_id=PF00216 from=1 to=90 evalue=3.1e-22 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
ACD52_54_3

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611..1624
DNA (1014bp) protein (338aa)
ABC transporter related protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R070_PIRSD (db=UNIREF evalue=9.0e-90 bit_score=333.0 identity=46.27 coverage=98.8165680473373)
ABC transporter
ABC transporter
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF16 from=5 to=315 evalue=1.5e-84)
ACD52_54_4

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1617..2417
DNA (801bp) protein (267aa)
ABC-2 transporter family protein
Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0A9_9BACT (db=UNIREF evalue=2.0e-21 bit_score=106.0 identity=29.92 coverage=98.12734082397)
seg (db=Seg db_id=seg from=143 to=167)
transmembrane_regions (db=TMHMM db_id=tmhmm from=232 to=254)
ACD52_54_5

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2414..3208
DNA (795bp) protein (265aa)
ABC transporter permease
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=40 to=52)
transmembrane_regions (db=TMHMM db_id=tmhmm from=227 to=249)
ACD52_54_6

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3166..4170
DNA (1005bp) protein (335aa)
tRNA isopentenyltransferase MiaA
seg (db=Seg db_id=seg from=26 to=40)
miaA: tRNA delta(2)-isopentenylpyrophosphate (db=HMMTigr db_id=TIGR00174 from=19 to=315 evalue=6.7e-55 interpro_id=IPR018022 interpro_description=tRNA delta(2)-isopentenylpyrophosphate transferase)
IPPT (db=HMMPfam db_id=PF01715 from=52 to=312 evalue=7.8e-49 interpro_id=IPR002627 interpro_description=tRNA isopentenyltransferase GO=Molecular Function: tRNA isopentenyltransferase activity (GO:0004811), Molecular Function: ATP binding (GO:0005524), Biological Process: tRNA processing (GO:0008033))
ACD52_54_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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4167..5225
DNA (1059bp) protein (353aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=263 to=285)
transmembrane_regions (db=TMHMM db_id=tmhmm from=306 to=339)
seg (db=Seg db_id=seg from=166 to=177)
ACD52_54_8
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

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5728..5964
DNA (237bp) protein (79aa)
D-tyrosyl-tRNA(Tyr) deacylase
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=DTD_ACIBL (db=UNIREF evalue=8.0e-13 bit_score=75.9 identity=52.7 coverage=89.873417721519)
D-TYROSYL-TRNA(TYR) DEACYLASE (db=HMMPanther db_id=PTHR10472:SF4 from=1 to=73 evalue=2.5e-23)
D-TYROSYL-TRNA(TYR) DEACYLASE (db=HMMPanther db_id=PTHR10472 from=1 to=73 evalue=2.5e-23 interpro_id=IPR003732 interpro_description=D-tyrosyl-tRNA(Tyr) deacylase GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788), Biological Process: D-amino acid catabolic process (GO:0019478))
ACD52_54_9

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6005..6217
DNA (213bp) protein (71aa)
dtd; D-tyrosyl-tRNA(Tyr) deacylase
D-TYROSYL-TRNA(TYR) DEACYLASE (db=HMMPanther db_id=PTHR10472:SF4 from=1 to=71 evalue=1.0e-25)
D-TYROSYL-TRNA(TYR) DEACYLASE (db=HMMPanther db_id=PTHR10472 from=1 to=71 evalue=1.0e-25 interpro_id=IPR003732 interpro_description=D-tyrosyl-tRNA(Tyr) deacylase GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788), Biological Process: D-amino acid catabolic process (GO:0019478))
Tyr_Deacylase (db=HMMPfam db_id=PF02580 from=2 to=71 evalue=1.6e-18 interpro_id=IPR003732 interpro_description=D-tyrosyl-tRNA(Tyr) deacylase GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788), Biological Process: D-amino acid catabolic process (GO:0019478))
Displaying 9 items

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