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ACD52_58

Alias: ACD52_30327.2818.6

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_58_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(3..302)
DNA (300bp) protein (100aa)
seg (db=Seg db_id=seg from=18 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=11 to=31 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=10 to=35 evalue=0.013 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
ACD52_58_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(305..1657)
DNA (1353bp) protein (451aa)
seg (db=Seg db_id=seg from=71 to=82)
transmembrane_regions (db=TMHMM db_id=tmhmm from=16 to=38)
Cna protein B-type domain (db=superfamily db_id=SSF49478 from=370 to=448 evalue=0.00019 interpro_id=IPR008970 interpro_description=Collagen-binding surface protein Cna, B-type domain GO=Molecular Function: binding (GO:0005488))
seg 71..82 Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_58_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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1694..2851
DNA (1158bp) protein (386aa)
type IV pilus assembly protein PilM
transmembrane_regions (db=TMHMM db_id=tmhmm from=311 to=333)
Competence_A (db=HMMPfam db_id=PF11104 from=37 to=165 evalue=1.9e-10)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=42 to=163 evalue=4.0e-08)
Displaying 3 items

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