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ACD52_64

Alias: ACD52_30686.8630.8

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_64_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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1..87
DNA (87bp) protein (29aa)
1..87 + (rbs_motif=None rbs_spacer=None)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_64_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(90..1094)
DNA (1005bp) protein (335aa)
hypothetical protein
hypothetical protein
dTDP-glucose 4,6-dehydratase n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12TY1_METBU (db=UNIREF evalue=1.0e-100 bit_score=370.0 identity=54.83 coverage=94.3283582089552)
dTDP_gluc_dehyt: dTDP-glucose 4,6-deh (db=HMMTigr db_id=TIGR01181 from=2 to=320 evalue=1.5e-167 interpro_id=IPR005888 interpro_description=dTDP-glucose 4,6-dehydratase GO=Molecular Function: dTDP-glucose 4,6-dehydratase activity (GO:0008460), Biological Process: nucleotide-sugar metabolic process (GO:0009225))
ACD52_64_3

Not on your lists

comp(1095..1817)
DNA (723bp) protein (241aa)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYJ6_THERP (db=UNIREF evalue=5.0e-89 bit_score=330.0 identity=66.39 coverage=97.5103734439834)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
SUGAR-1-PHOSPHATE GUANYL TRANSFERASE (db=HMMPanther db_id=PTHR22572 from=11 to=231 evalue=6.4e-88)
ACD52_64_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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1897..2973
DNA (1077bp) protein (359aa)
ppsA; putative phosphoenolpyruvate synthase (EC:2.7.9.2)
seg (db=Seg db_id=seg from=243 to=254)
Phosphohistidine domain (db=superfamily db_id=SSF52009 from=238 to=358 evalue=1.1e-31 interpro_id=IPR008279 interpro_description=PEP-utilising enzyme, mobile domain GO=Biological Process: phosphorylation (GO:0016310), Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772))
no description (db=Gene3D db_id=G3DSA:3.50.30.10 from=244 to=357 evalue=1.4e-27 interpro_id=IPR008279 interpro_description=PEP-utilising enzyme, mobile domain GO=Biological Process: phosphorylation (GO:0016310), Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772))
ACD52_64_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(2978..3475)
DNA (498bp) protein (166aa)
hypothetical protein
DUF458 (db=HMMPfam db_id=PF04308 from=19 to=165 evalue=3.7e-45 interpro_id=IPR007405 interpro_description=Protein of unknown function DUF458, RNase H-like)
protein of unknown function DUF458; K09776 hypothetical protein alias=ACD52_30686.8630.8G0005,ACD52_30686.8630.8_5,ACD52_C00064G00005 id=75153 tax=ACD52 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
hypothetical protein; K09776 hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_64_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(3484..3744)
DNA (261bp) protein (87aa)
seg (db=Seg db_id=seg from=60 to=71)
seg (db=Seg db_id=seg from=12 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=50)
ACD52_64_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(3741..4607)
DNA (867bp) protein (289aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=238 to=245)
transmembrane_regions (db=TMHMM db_id=tmhmm from=265 to=282)
ACD52_64_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

4642..5910
DNA (1269bp) protein (423aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=70)
seg (db=Seg db_id=seg from=36 to=66)
seg (db=Seg db_id=seg from=341 to=354)
DPP6 N-terminal domain-like (db=superfamily db_id=SSF82171 from=265 to=392 evalue=7.0e-07)
ACD52_64_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(5913..7565)
DNA (1653bp) protein (551aa)
alpha-glucan phosphorylase (EC:2.4.1.1)
alpha-glucan phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFT9_THET1 (db=UNIREF evalue=4.0e-80 bit_score=303.0 identity=37.04 coverage=98.7295825771325)
seg (db=Seg db_id=seg from=26 to=40)
ACD52_64_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

7585..7950
DNA (366bp) protein (122aa)
RmlC-like cupins (db=superfamily db_id=SSF51182 from=1 to=110 evalue=3.4e-06 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
RmlC-like cupins Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_64_11
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

7980..8279
DNA (300bp) protein (100aa)
7980..8279 + (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_64_12
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

8376..8663
DNA (288bp) protein (96aa)
8376..8663 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
Displaying 12 items

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