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ACD52_69

Alias: ACD52_470510.8962.7

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_69_1

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277..843
DNA (567bp) protein (189aa)
hypothetical protein
Heavy metal transport/detoxification protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QX66_METTR (db=UNIREF evalue=8.0e-18 bit_score=93.2 identity=28.12 coverage=95.7671957671958)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
ACD52_69_2

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866..1081
DNA (216bp) protein (72aa)
HMA, heavy metal-associated domain (db=superfamily db_id=SSF55008 from=1 to=71 evalue=4.0e-10 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA (db=HMMPfam db_id=PF00403 from=10 to=68 evalue=3.3e-08 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
no description (db=Gene3D db_id=G3DSA:3.30.70.100 from=2 to=70 evalue=9.4e-06)
COPPER-TRANSPORTING ATPASE P-TYPE (COPA) (db=HMMPanther db_id=PTHR11939:SF39 from=13 to=71 evalue=0.00019)
ACD52_69_3

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1125..2804
DNA (1680bp) protein (560aa)
hypothetical protein cdiviTM7_02864 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2083 (db=UNIREF evalue=9.0e-28 bit_score=129.0 identity=25.93 coverage=85.8928571428571)
transmembrane_regions (db=TMHMM db_id=tmhmm from=453 to=472)
transmembrane_regions (db=TMHMM db_id=tmhmm from=427 to=449)
transmembrane_regions (db=TMHMM db_id=tmhmm from=364 to=386)
ACD52_69_4

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comp(3478..4911)
DNA (1434bp) protein (478aa)
hypothetical protein
hypothetical protein
Cysteinyl-tRNA synthetase n=2 Tax=Dictyoglomus RepID=SYC_DICT6 (db=UNIREF evalue=4.0e-125 bit_score=451.0 identity=50.42 coverage=95.81589958159)
seg (db=Seg db_id=seg from=330 to=341)
ACD52_69_5

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comp(4918..5382)
DNA (465bp) protein (155aa)
coiled-coil (db=Coil db_id=coil from=70 to=110 evalue=NA)
seg (db=Seg db_id=seg from=86 to=100)
seg (db=Seg db_id=seg from=122 to=138)
Uncharacterized protein {ECO:0000313|EMBL:EKD62285.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_69_6

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comp(5390..5995)
DNA (606bp) protein (202aa)
recR; recombination protein RecR
seg (db=Seg db_id=seg from=159 to=170)
RECR (db=PatternScan db_id=PS01300 from=57 to=78 evalue=0.0 interpro_id=IPR015967 interpro_description=Zinc finger C4-type, RecR GO=Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
recR: recombination protein RecR (db=HMMTigr db_id=TIGR00615 from=1 to=199 evalue=4.0e-87 interpro_id=IPR000093 interpro_description=RecR protein GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
ACD52_69_7

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comp(5992..7332)
DNA (1341bp) protein (447aa)
xylan 1,4-beta-xylosidase (EC:3.2.1.37); K01198 xylan 1,4-beta-xylosidase [EC:3.2.1.37] (db=KEGG evalue=6.0e-19 bit_score=99.4 identity=24.93 coverage=65.9955257270693)
no description (db=Gene3D db_id=G3DSA:3.20.20.80 from=25 to=351 evalue=6.2e-32 interpro_id=IPR013781 interpro_description=Glycoside hydrolase, subgroup, catalytic core GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: cation binding (GO:0043169))
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=21 to=352 evalue=5.6e-26 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core)
Glyco_hydro_39 (db=HMMPfam db_id=PF01229 from=71 to=247 evalue=4.0e-20 interpro_id=IPR000514 interpro_description=Glycoside hydrolase, family 39 GO=Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolic process (GO:0005975))
ACD52_69_8

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comp(7376..7663)
DNA (288bp) protein (96aa)
coiled-coil (db=Coil db_id=coil from=11 to=32 evalue=NA)
coiled-coil (db=Coil db_id=coil from=61 to=82 evalue=NA)
seg (db=Seg db_id=seg from=73 to=94)
YbaB-like (db=superfamily db_id=SSF82607 from=8 to=86 evalue=1.9e-07 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
ACD52_69_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(7669..8994)
DNA (1326bp) protein (442aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
seg (db=Seg db_id=seg from=136 to=145)
REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT (db=HMMPanther db_id=PTHR11669 from=31 to=239 evalue=5.2e-46)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=6 to=184 evalue=6.7e-35)
Displaying 9 items

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