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ACD52_75

Alias: ACD52_531036.6667.6

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_75_1

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491..979
DNA (489bp) protein (163aa)
mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
MurD-like peptide ligases, peptide-binding domain (db=superfamily db_id=SSF53244 from=17 to=161 evalue=5.9e-16 interpro_id=IPR004101 interpro_description=Mur ligase, C-terminal GO=Molecular Function: ATP binding (GO:0005524), Biological Process: biosynthetic process (GO:0009058), Molecular Function: ligase activity (GO:0016874))
UDP-N-ACETYLMURAMATE--L-ALANINE LIGASE (db=HMMPanther db_id=PTHR23135:SF5 from=1 to=162 evalue=7.9e-14)
MUR LIGASE FAMILY MEMBER (db=HMMPanther db_id=PTHR23135 from=1 to=162 evalue=7.9e-14)
ACD52_75_2

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980..1684
DNA (705bp) protein (235aa)
980..1684 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD62211.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_75_3

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1893..2762
DNA (870bp) protein (290aa)
threonine synthase (EC:4.2.3.1)
seg (db=Seg db_id=seg from=60 to=71)
Tryptophan synthase beta subunit-like PLP-dependent enzymes (db=superfamily db_id=SSF53686 from=1 to=289 evalue=3.8e-47 interpro_id=IPR001926 interpro_description=Pyridoxal phosphate-dependent enzyme, beta subunit GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152), Molecular Function: pyridoxal phosphate binding (GO:0030170))
PALP (db=HMMPfam db_id=PF00291 from=13 to=285 evalue=3.7e-42 interpro_id=IPR001926 interpro_description=Pyridoxal phosphate-dependent enzyme, beta subunit GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152), Molecular Function: pyridoxal phosphate binding (GO:0030170))
ACD52_75_4

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comp(2736..3317)
DNA (582bp) protein (194aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=168 to=190)
transmembrane_regions (db=TMHMM db_id=tmhmm from=114 to=148)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=79)
seg (db=Seg db_id=seg from=116 to=142)
ACD52_75_5

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3709..4275
DNA (567bp) protein (189aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=16 to=32)
Uncharacterized protein {ECO:0000313|EMBL:EKD62206.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_75_6

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comp(4285..4473)
DNA (189bp) protein (63aa)
4285..4473 - (rbs_motif=TAA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD62207.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_75_7
R_RIF_OP11_02_38_20, RIF-OP11-2, Microgenomates, Bacteria

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comp(4497..4775)
DNA (279bp) protein (93aa)
hypothetical protein (db=KEGG evalue=3.0e-08 bit_score=60.5 identity=40.85 coverage=75.2688172043011)
seg (db=Seg db_id=seg from=76 to=83)
hypothetical protein alias=ACD52_531036.6667.6G0007,ACD52_531036.6667.6_7,ACD52_C00075G00007 id=75259 tax=ACD52 species=Methylacidiphilum infernorum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia organism_group=OP11 organism_desc=OP11
helicase family protein with metal-binding cysteine cluster Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_38_20_curated
ACD52_75_8

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6212..6700
DNA (489bp) protein (163aa)
seg (db=Seg db_id=seg from=106 to=116)
coiled-coil (db=Coil db_id=coil from=121 to=149 evalue=NA)
coiled-coil (db=Coil db_id=coil from=59 to=116 evalue=NA)
DUF2130 (db=HMMPfam db_id=PF09903 from=118 to=160 evalue=2.4e-06 interpro_id=IPR019219 interpro_description=Protein of unknown function DUF2130)
Displaying 8 items

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