ggKbase home page

ACD52_76

Alias: ACD52_356515.7781.7

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_76_1

Not on your lists


comp(42..467)
DNA (426bp) protein (142aa)
rplK; 50S ribosomal protein L11
seg (db=Seg db_id=seg from=3 to=10)
RIBOSOMAL_L11 (db=PatternScan db_id=PS00359 from=126 to=141 evalue=0.0 interpro_id=IPR020785 interpro_description=Ribosomal protein L11, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L11_bact: ribosomal protein L11 (db=HMMTigr db_id=TIGR01632 from=3 to=141 evalue=1.6e-77 interpro_id=IPR006519 interpro_description=Ribosomal protein L11, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD52_76_2

Not on your lists

comp(597..2318)
DNA (1722bp) protein (574aa)
hypothetical protein
hypothetical protein
Threonyl-tRNA synthetase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDN7_THET1 (db=UNIREF evalue=1.0e-153 bit_score=547.0 identity=50.55 coverage=93.205574912892)
coiled-coil (db=Coil db_id=coil from=495 to=516 evalue=NA)
ACD52_76_3

Not on your lists

comp(2447..3241)
DNA (795bp) protein (265aa)
metal dependent phosphohydrolase
seg (db=Seg db_id=seg from=252 to=261)
HD (db=HMMPfam db_id=PF01966 from=63 to=175 evalue=4.0e-07 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=40 to=176 evalue=9.6e-06)
ACD52_76_4

Not on your lists

comp(3243..4970)
DNA (1728bp) protein (576aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components n=2 Tax=Magnetospirillum RepID=Q2W1T6_MAGSA (db=UNIREF evalue=6.0e-91 bit_score=338.0 identity=37.3 coverage=95.1388888888889)
transmembrane_regions (db=TMHMM db_id=tmhmm from=158 to=177)
ACD52_76_5

Not on your lists

comp(5250..5882)
DNA (633bp) protein (211aa)
5250..5882 - (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD62467.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_76_6

Not on your lists

comp(5923..6801)
DNA (879bp) protein (293aa)
hypothetical protein
seg (db=Seg db_id=seg from=188 to=204)
Trigger factor ribosome-binding domain (db=superfamily db_id=SSF102735 from=12 to=138 evalue=7.3e-23 interpro_id=IPR008881 interpro_description=Trigger factor, ribosome-binding, bacterial GO=Biological Process: protein folding (GO:0006457), Biological Process: protein transport (GO:0015031))
Trigger_N (db=HMMPfam db_id=PF05697 from=13 to=141 evalue=2.4e-22 interpro_id=IPR008881 interpro_description=Trigger factor, ribosome-binding, bacterial GO=Biological Process: protein folding (GO:0006457), Biological Process: protein transport (GO:0015031))
ACD52_76_7

Not on your lists

comp(6805..6951)
DNA (147bp) protein (49aa)
6805..6951 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD62469.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_76_8

Not on your lists

comp(6948..7286)
DNA (339bp) protein (113aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=106)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
seg (db=Seg db_id=seg from=31 to=42)
ACD52_76_9

Not on your lists

comp(7297..7815)
DNA (519bp) protein (173aa)
seg (db=Seg db_id=seg from=93 to=109)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=9 to=168 evalue=1.8e-14)
Peptidase_S9 (db=HMMPfam db_id=PF00326 from=6 to=171 evalue=3.2e-09 interpro_id=IPR001375 interpro_description=Peptidase S9, prolyl oligopeptidase, catalytic domain GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type peptidase activity (GO:0008236))
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=1 to=171 evalue=9.4e-07)
Displaying 9 items

View Taxonomy