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ACD52_86

Alias: ACD52_283444.5857.8

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_86_1

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comp(2..2752)
DNA (2751bp) protein (917aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Ammonifex degensii KC4 RepID=C9R8J8_AMMDK (db=UNIREF evalue=0.0 bit_score=900.0 identity=50.91 coverage=98.1461286804798)
seg (db=Seg db_id=seg from=467 to=473)
ACD52_86_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(2861..3814)
DNA (954bp) protein (318aa)
YceG family protein
seg (db=Seg db_id=seg from=5 to=14)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
YceG (db=HMMPfam db_id=PF02618 from=42 to=314 evalue=5.8e-72 interpro_id=IPR003770 interpro_description=Uncharacterised protein family YceG-like)
ACD52_86_3

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comp(3819..4019)
DNA (201bp) protein (67aa)
3819..4019 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD62600.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_86_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(4012..4389)
DNA (378bp) protein (126aa)
hypothetical protein
UPF0081 (db=HMMPfam db_id=PF03652 from=1 to=123 evalue=5.2e-26 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=125 evalue=1.5e-24 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.140 from=2 to=122 evalue=7.0e-22 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
ACD52_86_5

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comp(4386..5057)
DNA (672bp) protein (224aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Sortase (db=HMMPfam db_id=PF04203 from=88 to=219 evalue=4.6e-22 interpro_id=IPR005754 interpro_description=Peptidase C60, sortase A/B)
Sortase (db=superfamily db_id=SSF63817 from=71 to=223 evalue=2.7e-20)
ACD52_86_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(5060..5890)
DNA (831bp) protein (277aa)
hypothetical protein (db=KEGG evalue=7.0e-11 bit_score=71.2 identity=24.8 coverage=85.1985559566787)
seg (db=Seg db_id=seg from=143 to=160)
coiled-coil (db=Coil db_id=coil from=90 to=111 evalue=NA)
hypothetical protein alias=ACD52_C00086G00006,ACD52_283444.5857.8G0006,ACD52_283444.5857.8_6 id=75365 tax=ACD52 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
Displaying 6 items

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